RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 HMGCS2P54868 508 aa20.26■□□□□ 0.83
SREK1-216ENST00000612404 HEATR3Q7Z4Q2 680 aa20.26■□□□□ 0.83
SREK1-216ENST00000612404 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
SREK1-216ENST00000612404 KCNJ14Q9UNX9 436 aa20.26■□□□□ 0.83
SREK1-216ENST00000612404 SYDE2Q5VT97 1194 aa20.25■□□□□ 0.83
SREK1-216ENST00000612404 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
SREK1-216ENST00000612404 OTUD5Q96G74 571 aa20.25■□□□□ 0.83
SREK1-216ENST00000612404 GBA2Q9HCG7 927 aaPredicted RBP20.25■□□□□ 0.83
SREK1-216ENST00000612404 WDR46O15213 610 aaKnown RBP20.24■□□□□ 0.83
SREK1-216ENST00000612404 ERO1BQ86YB8 467 aa20.24■□□□□ 0.83
SREK1-216ENST00000612404 C19orf81C9J6K1 198 aa20.24■□□□□ 0.83
SREK1-216ENST00000612404 VCAM1P19320 739 aa20.24■□□□□ 0.83
SREK1-216ENST00000612404 LDLRAD1Q5T700 205 aa20.24■□□□□ 0.83
SREK1-216ENST00000612404 C2orf69Q8N8R5 385 aa20.24■□□□□ 0.83
SREK1-216ENST00000612404 CHURC1Q8WUH1 139 aa20.24■□□□□ 0.83
SREK1-216ENST00000612404 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
SREK1-216ENST00000612404 ITGBL1O95965 494 aaPredicted RBP20.23■□□□□ 0.83
SREK1-216ENST00000612404 PPATQ06203 517 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 GNL2Q13823 731 aaKnown RBP20.23■□□□□ 0.83
SREK1-216ENST00000612404 WWC2Q6AWC2 1192 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 BTNL9Q6UXG8 535 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 TMOD4Q9NZQ9 345 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 PNMA6FA0A0J9YX94 578 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 ZBTB5O15062 677 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 FKBP1BP68106 108 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 SAFBQ15424 915 aaKnown RBP eCLIP20.23■□□□□ 0.83
SREK1-216ENST00000612404 RGS22Q8NE09 1264 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
SREK1-216ENST00000612404 SHISA4Q96DD7 197 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 BARHL2Q9NY43 387 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 PRR12Q9ULL5 1215 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 ATP6V1DQ9Y5K8 247 aa20.23■□□□□ 0.83
SREK1-216ENST00000612404 MMP1P03956 469 aa20.22■□□□□ 0.83
SREK1-216ENST00000612404 SNAP25P60880 206 aa20.22■□□□□ 0.83
SREK1-216ENST00000612404 CDC37Q16543 378 aaPredicted RBP20.22■□□□□ 0.83
SREK1-216ENST00000612404 OPTNQ96CV9 577 aa20.22■□□□□ 0.83
SREK1-216ENST00000612404 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
SREK1-216ENST00000612404 ZSCAN16Q9H4T2 348 aaPredicted RBP20.22■□□□□ 0.83
SREK1-216ENST00000612404 RPAP3Q9H6T3 665 aaPredicted RBP20.22■□□□□ 0.83
SREK1-216ENST00000612404 FBXO28Q9NVF7 368 aa20.22■□□□□ 0.83
SREK1-216ENST00000612404 IRF6O14896 467 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 NLRP5P59047 1200 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 RESTQ13127 1097 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 FAM160B2Q86V87 743 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 CHAMP1Q96JM3 812 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 SH3GLB2Q9NR46 395 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 STXBP3O00186 592 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 NAPAP54920 295 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
SREK1-216ENST00000612404 GBP4Q96PP9 640 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 PHF20Q9BVI0 1012 aa20.21■□□□□ 0.83
SREK1-216ENST00000612404 PLA2G6O60733 806 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 DIS3L2Q8IYB7 885 aaKnown RBP20.2■□□□□ 0.82
SREK1-216ENST00000612404 CCDC148Q8NFR7 591 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 C12orf42Q96LP6 360 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 FLOT1O75955 427 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 BAG4O95429 457 aaKnown RBP20.2■□□□□ 0.82
SREK1-216ENST00000612404 PPIL2Q13356 520 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 CST9Q5W186 159 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 TYW1BQ6NUM6 668 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 FAM173BQ6P4H8 233 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 CCDC12Q8WUD4 166 aaPredicted RBP20.2■□□□□ 0.82
SREK1-216ENST00000612404 COA7Q96BR5 231 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 BRMS1Q9HCU9 246 aa20.2■□□□□ 0.82
SREK1-216ENST00000612404 UNCXA6NJT0 531 aa20.19■□□□□ 0.82
SREK1-216ENST00000612404 KIF3CO14782 793 aa20.19■□□□□ 0.82
SREK1-216ENST00000612404 PPP1R11O60927 126 aaPredicted RBP20.19■□□□□ 0.82
SREK1-216ENST00000612404 SLF1Q9BQI6 1058 aa20.19■□□□□ 0.82
SREK1-216ENST00000612404 BTBD18B2RXH4 712 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 SH3D19Q5HYK7 790 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 GADL1Q6ZQY3 521 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
SREK1-216ENST00000612404 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
SREK1-216ENST00000612404 CALML3P27482 149 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 KRT2P35908 639 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 OXER1Q8TDS5 423 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 TRPM7Q96QT4 1865 aa20.18■□□□□ 0.82
SREK1-216ENST00000612404 PTPRFP10586 1907 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 CXCL11O14625 94 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
SREK1-216ENST00000612404 NR5A1Q13285 461 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 CCDC174Q6PII3 467 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 PCDHA1Q9Y5I3 950 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 A0A0G2JLL6 359 aaPredicted RBP20.17■□□□□ 0.82
SREK1-216ENST00000612404 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.827e-12■■■□□ 15.1
SREK1-216ENST00000612404 DNM1Q05193 864 aaKnown RBP20.17■□□□□ 0.82
SREK1-216ENST00000612404 USH1GQ495M9 461 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 BRAPQ7Z569 592 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 PRRT2Q7Z6L0 340 aaPredicted RBP20.17■□□□□ 0.82
SREK1-216ENST00000612404 FBXO11Q86XK2 927 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 AMNQ9BXJ7 453 aa20.17■□□□□ 0.82
SREK1-216ENST00000612404 FOXP1Q9H334 677 aaPredicted RBP20.17■□□□□ 0.82
SREK1-216ENST00000612404 KCNH4Q9UQ05 1017 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms