RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SLX4Q8IY92 1834 aa31.86■■■□□ 2.69
CSPG5-205ENST00000610462 H0YIN7 160 aa31.86■■■□□ 2.69
CSPG5-205ENST00000610462 FMR1Q06787 632 aaKnown RBP eCLIP31.86■■■□□ 2.69
CSPG5-205ENST00000610462 DBNDD1Q9H9R9 158 aa31.86■■■□□ 2.69
CSPG5-205ENST00000610462 SEC63Q9UGP8 760 aaKnown RBP31.86■■■□□ 2.69
CSPG5-205ENST00000610462 PDHBP11177 359 aa31.85■■■□□ 2.69
CSPG5-205ENST00000610462 RXRBP28702 533 aa31.85■■■□□ 2.69
CSPG5-205ENST00000610462 ERCC5P28715 1186 aaPredicted RBP31.85■■■□□ 2.69
CSPG5-205ENST00000610462 DPF2Q92785 391 aa31.85■■■□□ 2.69
CSPG5-205ENST00000610462 GSDMAQ96QA5 445 aa31.85■■■□□ 2.69
CSPG5-205ENST00000610462 C10orf71Q711Q0 1435 aa31.85■■■□□ 2.69
CSPG5-205ENST00000610462 INF2Q27J81 1249 aa31.85■■■□□ 2.69
CSPG5-205ENST00000610462 RIOX1Q9H6W3 641 aa31.85■■■□□ 2.69
CSPG5-205ENST00000610462 CRKP46108 304 aa31.84■■■□□ 2.69
CSPG5-205ENST00000610462 HOMER1Q86YM7 354 aa31.84■■■□□ 2.69
CSPG5-205ENST00000610462 C6orf50Q9HD87 102 aa31.84■■■□□ 2.69
CSPG5-205ENST00000610462 ZNF646O15015 1829 aaPredicted RBP31.84■■■□□ 2.69
CSPG5-205ENST00000610462 GREB1LQ9C091 1923 aaPredicted RBP31.84■■■□□ 2.69
CSPG5-205ENST00000610462 FKBP1AP62942 108 aaKnown RBP31.84■■■□□ 2.69
CSPG5-205ENST00000610462 KRT25Q7Z3Z0 450 aa31.84■■■□□ 2.69
CSPG5-205ENST00000610462 GNA11P29992 359 aa31.83■■■□□ 2.69
CSPG5-205ENST00000610462 ASPRV1Q53RT3 343 aa31.83■■■□□ 2.69
CSPG5-205ENST00000610462 PDXDC2PQ6P474 469 aa31.83■■■□□ 2.69
CSPG5-205ENST00000610462 PIGSQ96S52 555 aa31.83■■■□□ 2.69
CSPG5-205ENST00000610462 MRIQ9BWK5 157 aa31.83■■■□□ 2.69
CSPG5-205ENST00000610462 NFE2L3Q9Y4A8 694 aa31.83■■■□□ 2.69
CSPG5-205ENST00000610462 SMCO2A6NFE2 343 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 HLA-DOAP06340 250 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 SHMT1P34896 483 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 CFAP100Q494V2 611 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 MYRIPQ8NFW9 859 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 ZDHHC15Q96MV8 337 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 VAT1LQ9HCJ6 419 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 KCNQ5Q9NR82 932 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 SCN9AQ15858 1988 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 SNHG28P0DPA3 235 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 ZNF18P17022 549 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 TXLNAP40222 546 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 SOGA3Q5TF21 947 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 ARMCX5Q6P1M9 558 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 DTHD1Q6ZMT9 781 aa31.82■■■□□ 2.68
CSPG5-205ENST00000610462 hCG_1984214I3L0E3 225 aa31.81■■■□□ 2.68
CSPG5-205ENST00000610462 LAD1O00515 517 aa31.81■■■□□ 2.68
CSPG5-205ENST00000610462 TTLL1O95922 423 aa31.81■■■□□ 2.68
CSPG5-205ENST00000610462 CASP1P29466 404 aa31.81■■■□□ 2.68
CSPG5-205ENST00000610462 STRIP1Q5VSL9 837 aa31.81■■■□□ 2.68
CSPG5-205ENST00000610462 LRRC47Q8N1G4 583 aaKnown RBP31.81■■■□□ 2.68
CSPG5-205ENST00000610462 ZNF713Q8N859 430 aaPredicted RBP31.81■■■□□ 2.68
CSPG5-205ENST00000610462 UBA5Q9GZZ9 404 aa31.81■■■□□ 2.68
CSPG5-205ENST00000610462 MED15Q96RN5 788 aa31.8■■■□□ 2.68
CSPG5-205ENST00000610462 TMEM60Q9H2L4 133 aa31.8■■■□□ 2.68
CSPG5-205ENST00000610462 MYH4Q9Y623 1939 aa31.8■■■□□ 2.68
CSPG5-205ENST00000610462 FRMPD2Q68DX3 1309 aaPredicted RBP31.8■■■□□ 2.68
CSPG5-205ENST00000610462 ESYT2A0FGR8 921 aa31.8■■■□□ 2.68
CSPG5-205ENST00000610462 RRP9O43818 475 aaKnown RBP31.8■■■□□ 2.68
CSPG5-205ENST00000610462 TRMT44Q8IYL2 757 aaKnown RBP31.8■■■□□ 2.68
CSPG5-205ENST00000610462 SFPQP23246 707 aaKnown RBP eCLIP31.79■■■□□ 2.68
CSPG5-205ENST00000610462 NONOQ15233 471 aaKnown RBP eCLIP31.79■■■□□ 2.68
CSPG5-205ENST00000610462 VSTM4Q8IW00 320 aa31.79■■■□□ 2.68
CSPG5-205ENST00000610462 EHD4Q9H223 541 aa31.79■■■□□ 2.68
CSPG5-205ENST00000610462 GTPBP6O43824 516 aaPredicted RBP31.79■■■□□ 2.68
CSPG5-205ENST00000610462 PRPHP41219 470 aa31.79■■■□□ 2.68
CSPG5-205ENST00000610462 NFIAQ12857 509 aa31.79■■■□□ 2.68
CSPG5-205ENST00000610462 TPD52L1Q16890 204 aaPredicted RBP31.79■■■□□ 2.68
CSPG5-205ENST00000610462 KCND1Q9NSA2 647 aa31.79■■■□□ 2.68
CSPG5-205ENST00000610462 ECE2O60344 883 aa31.78■■■□□ 2.68
CSPG5-205ENST00000610462 EIF6P56537 245 aaKnown RBP31.78■■■□□ 2.68
CSPG5-205ENST00000610462 HDLBPQ00341 1268 aaKnown RBP31.78■■■□□ 2.68
CSPG5-205ENST00000610462 DACT2Q5SW24 774 aa31.78■■■□□ 2.68
CSPG5-205ENST00000610462 SIPA1L1O43166 1804 aa31.78■■■□□ 2.68
CSPG5-205ENST00000610462 STAMQ92783 540 aa31.77■■■□□ 2.68
CSPG5-205ENST00000610462 CNKSR1Q969H4 720 aa31.77■■■□□ 2.68
CSPG5-205ENST00000610462 CDK11BP21127 795 aaKnown RBP31.77■■■□□ 2.68
CSPG5-205ENST00000610462 CUL4BQ13620 913 aa31.77■■■□□ 2.68
CSPG5-205ENST00000610462 CLEC10AQ8IUN9 316 aa31.77■■■□□ 2.68
CSPG5-205ENST00000610462 KIAA0825Q8IV33 1275 aa31.77■■■□□ 2.68
CSPG5-205ENST00000610462 C16orf45Q96MC5 204 aaPredicted RBP31.77■■■□□ 2.68
CSPG5-205ENST00000610462 DYNC1I1O14576 645 aa31.76■■■□□ 2.68
CSPG5-205ENST00000610462 CD44P16070 742 aaKnown RBP31.76■■■□□ 2.68
CSPG5-205ENST00000610462 HSP90AA2PQ14568 343 aaPredicted RBP31.76■■■□□ 2.68
CSPG5-205ENST00000610462 MTRQ99707 1265 aa31.76■■■□□ 2.68
CSPG5-205ENST00000610462 INTS13Q9NVM9 706 aa31.76■■■□□ 2.67
CSPG5-205ENST00000610462 TMEM232C9JQI7 657 aa31.75■■■□□ 2.67
CSPG5-205ENST00000610462 CHRNA5P30532 468 aa31.75■■■□□ 2.67
CSPG5-205ENST00000610462 ZNF543Q08ER8 600 aa31.75■■■□□ 2.67
CSPG5-205ENST00000610462 SPATA1Q5VX52 437 aa31.75■■■□□ 2.67
CSPG5-205ENST00000610462 CCDC17Q96LX7 622 aa31.75■■■□□ 2.67
CSPG5-205ENST00000610462 BLZF1Q9H2G9 400 aa31.75■■■□□ 2.67
CSPG5-205ENST00000610462 DISC1Q9NRI5 854 aa31.75■■■□□ 2.67
CSPG5-205ENST00000610462 PPP1R3GB7ZBB8 358 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 CDC25AP30304 524 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 STAT6P42226 847 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 KARSQ15046 597 aaKnown RBP31.74■■■□□ 2.67
CSPG5-205ENST00000610462 HSP90AA4PQ58FG1 418 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 NEK8Q86SG6 692 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 ZFPM1Q8IX07 1006 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 CCSER1Q9C0I3 900 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 SAMSN1Q9NSI8 373 aaKnown RBP31.74■■■□□ 2.67
CSPG5-205ENST00000610462 ZNF219Q9P2Y4 722 aaPredicted RBP31.74■■■□□ 2.67
CSPG5-205ENST00000610462 SYNRGQ9UMZ2 1314 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 248.5 ms