RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 MCM3APO60318 1980 aa17.75■□□□□ 0.43
CDK5RAP3-226ENST00000583182 TMEM265A0A087WTH1 108 aa17.75■□□□□ 0.43
CDK5RAP3-226ENST00000583182 KLHDC9Q8NEP7 349 aa17.75■□□□□ 0.43
CDK5RAP3-226ENST00000583182 TOX2Q96NM4 488 aa17.75■□□□□ 0.43
CDK5RAP3-226ENST00000583182 SLF1Q9BQI6 1058 aa17.75■□□□□ 0.43
CDK5RAP3-226ENST00000583182 STARD7Q9NQZ5 370 aa17.75■□□□□ 0.43
CDK5RAP3-226ENST00000583182 DNAJC25-GNG10A0A024R161 153 aa17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 MYADML2A6NDP7 307 aa17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 IRX5P78411 483 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 GRIN2CQ14957 1233 aa17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 SNRNP48Q6IEG0 339 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 CCSAPQ6IQ19 270 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 MSL3Q8N5Y2 521 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 TEX13BQ9BXU2 312 aa17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 COG6Q9Y2V7 657 aa17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 MYH4Q9Y623 1939 aa17.74■□□□□ 0.43
CDK5RAP3-226ENST00000583182 SYNGAP1Q96PV0 1343 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 RASA1P20936 1047 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 DNAJB2P25686 324 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 KCNA10Q16322 511 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 MAMDC4Q6UXC1 1216 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 STK11IPQ8N1F8 1099 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 ARPP21Q9UBL0 812 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 ZHX1Q9UKY1 873 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 FAM184BQ9ULE4 1060 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 DDX19BQ9UMR2 479 aa17.73■□□□□ 0.43
CDK5RAP3-226ENST00000583182 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 MOXD2PA6NHM9 499 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 DCDC2CA8MYV0 355 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 F5H6K3 240 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 ADCY6O43306 1168 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 NDUFB10O96000 172 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 KLRC3Q07444 240 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 USP38Q8NB14 1042 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 DDX11Q96FC9 970 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 FGD4Q96M96 766 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 STRBPQ96SI9 672 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 NYAP2Q9P242 653 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 TBX21Q9UL17 535 aa17.72■□□□□ 0.43
CDK5RAP3-226ENST00000583182 TTC28Q96AY4 2481 aa17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 GSG1L2A8MUP6 293 aa17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 DUSP11O75319 330 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 TIMP1P01033 207 aa17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 MS4A1P11836 297 aa17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 SLC4A3P48751 1232 aa17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 ZSCAN25Q6NSZ9 544 aa17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 CPXCR1Q8N123 301 aa17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 PRPF38AQ8NAV1 312 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-226ENST00000583182 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.439e-16■□□□□ 9
CDK5RAP3-226ENST00000583182 ATP2A1O14983 1001 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 CST5P28325 142 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 CDK7P50613 346 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ACVR2BQ13705 512 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 MFSD5Q6N075 450 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 C16orf59Q7L2K0 433 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ZNF467Q7Z7K2 595 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ZNF576Q9H609 170 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 MKNK2Q9HBH9 465 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 RAVER2Q9HCJ3 691 aaKnown RBP17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ELP1O95163 1332 aa17.7■□□□□ 0.42
CDK5RAP3-226ENST00000583182 IGKV6D-41A0A0C4DH26 115 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 MINDY4BA8MYZ0 360 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ASGR1P07306 291 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 C6orf222P0C671 652 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 TIFAQ96CG3 184 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 GLT1D1Q96MS3 346 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 PRDM6Q9NQX0 595 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 CLIP2Q9UDT6 1046 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 MUC3AQ02505 3323 aa17.69■□□□□ 0.42
CDK5RAP3-226ENST00000583182 GRXCR1A8MXD5 290 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ZBED4O75132 1171 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 CCDC144BQ3MJ40 725 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 TMEM240Q5SV17 173 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 OSBP2Q969R2 916 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 UPF3AQ9H1J1 476 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ABHD16BQ9H3Z7 469 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 SLC38A10Q9HBR0 1119 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 MROH7Q68CQ1 1323 aa17.68■□□□□ 0.42
CDK5RAP3-226ENST00000583182 MYO9BQ13459 2157 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 CTAGE5O15320 804 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 CSF2RAP15509 400 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 PBX2P40425 430 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 GJA9P57773 515 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 PPIGQ13427 754 aaKnown RBP eCLIP17.67■□□□□ 0.422e-14■■■■■ 28.1
CDK5RAP3-226ENST00000583182 RASIP1Q5U651 963 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 GIMAP6Q6P9H5 292 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ARMCX2Q7L311 632 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 MIER1Q8N108 512 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
CDK5RAP3-226ENST00000583182 PCSK9Q8NBP7 692 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms