RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CACNA2D4Q7Z3S7 1137 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 TMEM260Q9NX78 707 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 FAM205AQ6ZU69 1335 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 FAM196BA6NMK8 535 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 KLRF2D3W0D1 207 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 H0YHG0 523 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 SASH3O75995 380 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 PARP1P09874 1014 aaKnown RBP15.33■□□□□ 0.05
NDEL1-204ENST00000578172 FCER1AP12319 257 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 CAPN2P17655 700 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 SLC16A2P36021 539 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 TROAPQ12815 778 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 SYCP1Q15431 976 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 TEX11Q8IYF3 940 aa15.33■□□□□ 0.05
NDEL1-204ENST00000578172 NOC4LQ9BVI4 516 aaKnown RBP15.33■□□□□ 0.05
NDEL1-204ENST00000578172 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.04
NDEL1-204ENST00000578172 ERVV-1B6SEH8 477 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 MFAP3LO75121 409 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 GYPCP04921 128 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 NAPGQ99747 312 aaPredicted RBP15.33■□□□□ 0.04
NDEL1-204ENST00000578172 ABCB6Q9NP58 842 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 LMO7Q8WWI1 1683 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 UFL1O94874 794 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 NTSR2O95665 410 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 PMS1P54277 932 aaKnown RBP15.33■□□□□ 0.04
NDEL1-204ENST00000578172 NFIXQ14938 502 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 CTAGE1Q96RT6 745 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.33■□□□□ 0.04
NDEL1-204ENST00000578172 FHOD1Q9Y613 1164 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 XDHP47989 1333 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 PHLPP2Q6ZVD8 1323 aa15.33■□□□□ 0.04
NDEL1-204ENST00000578172 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 EPS15P42566 896 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 SCNN1DP51172 638 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 SNAP25P60880 206 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 GABPB1Q06547 395 aaPredicted RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 CCDC181Q5TID7 509 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 RBM28Q9NW13 759 aaKnown RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 TTC26A0AVF1 554 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 TCP10Q12799 353 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 NR1I3Q14994 352 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 CC2D1AQ6P1N0 951 aaPredicted RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 NOA1Q8NC60 698 aaKnown RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 RIN2Q8WYP3 895 aaPredicted RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 FERMT2Q96AC1 680 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 ZNF804BA4D1E1 1349 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 ZNF185O15231 689 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 PRPF3O43395 683 aaKnown RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 ERLIN1O75477 346 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 HNRNPH2P55795 449 aaKnown RBP15.32■□□□□ 0.04
NDEL1-204ENST00000578172 AGPAT5Q9NUQ2 364 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 RSPH14Q9UHP6 348 aa15.32■□□□□ 0.04
NDEL1-204ENST00000578172 BUB1O43683 1085 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 MDM2Q00987 491 aaPredicted RBP15.31■□□□□ 0.04
NDEL1-204ENST00000578172 ALX1Q15699 326 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 CABP7Q86V35 215 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
NDEL1-204ENST00000578172 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
NDEL1-204ENST00000578172 EPN1Q9Y6I3 576 aaPredicted RBP15.31■□□□□ 0.04
NDEL1-204ENST00000578172 SEC23AQ15436 765 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 SPA17Q15506 151 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 C2CD5Q86YS7 1000 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 RIOK1Q9BRS2 568 aaKnown RBP15.31■□□□□ 0.04
NDEL1-204ENST00000578172 PHF20Q9BVI0 1012 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 L2HGDHQ9H9P8 463 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 CALM1P0DP23 149 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 CALM2P0DP24 149 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 CALM3P0DP25 149 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 PLCG1P19174 1290 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 PIGSQ96S52 555 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 FAN1Q9Y2M0 1017 aa15.31■□□□□ 0.04
NDEL1-204ENST00000578172 SLIT3O75094 1523 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 CACNB3P54284 484 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 ERVK-24P63145 666 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 UTP14CQ5TAP6 766 aaKnown RBP15.3■□□□□ 0.04
NDEL1-204ENST00000578172 TCERG1LQ5VWI1 586 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 CCDC42Q96M95 316 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 UBE2SQ16763 222 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 CYP26C1Q6V0L0 522 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 ADD3Q9UEY8 706 aaKnown RBP15.3■□□□□ 0.04
NDEL1-204ENST00000578172 POTEMA6NI47 508 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 SLC7A5Q01650 507 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 GSDMAQ96QA5 445 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 PNKPQ96T60 521 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 EYA3Q99504 573 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 FAM107BQ9H098 131 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
NDEL1-204ENST00000578172 MRFAP1Q9Y605 127 aa15.3■□□□□ 0.04
NDEL1-204ENST00000578172 BAG3O95817 575 aa15.29■□□□□ 0.04
NDEL1-204ENST00000578172 ERCC5P28715 1186 aaPredicted RBP15.29■□□□□ 0.04
NDEL1-204ENST00000578172 CCDC40Q4G0X9 1142 aa15.29■□□□□ 0.04
NDEL1-204ENST00000578172 CCDC155Q8N6L0 562 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms