RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 SLC15A5A6NIM6 579 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 NDUFB10O96000 172 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 FGAP02671 866 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 XRCC5P13010 732 aaKnown RBP10.75□□□□□ -0.69
NDE1-207ENST00000573203 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
NDE1-207ENST00000573203 PTPREP23469 700 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 PDE4AP27815 886 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 GJA8P48165 433 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 MAP2K5Q13163 448 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 CWC27Q6UX04 472 aaKnown RBP10.75□□□□□ -0.69
NDE1-207ENST00000573203 TRIB2Q92519 343 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 USP6NLQ92738 828 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 MKL1Q969V6 931 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 NUP88Q99567 741 aaPredicted RBP10.75□□□□□ -0.69
NDE1-207ENST00000573203 APBA2Q99767 749 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 MOV10L1Q9BXT6 1211 aaKnown RBP10.75□□□□□ -0.69
NDE1-207ENST00000573203 BACH2Q9BYV9 841 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 INCENPQ9NQS7 918 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 TOMM22Q9NS69 142 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 FBXO28Q9NVF7 368 aa10.75□□□□□ -0.69
NDE1-207ENST00000573203 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.696e-6■■□□□ 13.9
NDE1-207ENST00000573203 RANBP6O60518 1105 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 SGPL1O95470 568 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 TFRCP02786 760 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 ERCC3P19447 782 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 TRIM32Q13049 653 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 RRP12Q5JTH9 1297 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 TTC22Q5TAA0 569 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 NCAPG2Q86XI2 1143 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 SHCBP1Q8NEM2 672 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 U2AF1L4Q8WU68 220 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 SHISA4Q96DD7 197 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 DEFB118Q96PH6 123 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.74□□□□□ -0.69
NDE1-207ENST00000573203 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 PPP1R9AQ9ULJ8 1098 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 ISY1Q9ULR0 285 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 SYNPO2Q9UMS6 1093 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 ZMYM6O95789 1325 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 RPTORQ8N122 1335 aa10.74□□□□□ -0.69
NDE1-207ENST00000573203 MKI67P46013 3256 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 ZNFX1Q9P2E3 1918 aaKnown RBP10.74□□□□□ -0.69
NDE1-207ENST00000573203 VWA5AO00534 786 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 STRNO43815 780 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 ORC4O43929 436 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 SLC25A27O95847 323 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 HAND2P61296 217 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 GRB14Q14449 540 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 TMEM132BQ14DG7 1078 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 CCL14Q16627 93 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 SLFN13Q68D06 897 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 DPP9Q86TI2 863 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 GMCL1P1Q8NEA9 526 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 SLF1Q9BQI6 1058 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 MROH8Q9H579 483 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 PAK6Q9NQU5 681 aaPredicted RBP10.73□□□□□ -0.69
NDE1-207ENST00000573203 ADAMTS5Q9UNA0 930 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 STX8Q9UNK0 236 aa10.73□□□□□ -0.69
NDE1-207ENST00000573203 CTDP1Q9Y5B0 961 aaPredicted RBP10.73□□□□□ -0.69
NDE1-207ENST00000573203 LAMA4Q16363 1823 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 ZNF236Q9UL36 1845 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 NMT2O60551 498 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 FGRP09769 529 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 BMP3P12645 472 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 GSPT1P15170 499 aaKnown RBP10.72□□□□□ -0.69
NDE1-207ENST00000573203 CAPN2P17655 700 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 ADORA2AP29274 412 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 STAT3P40763 770 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
NDE1-207ENST00000573203 MFSD14CQ5VZR4 134 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 PRPF38AQ8NAV1 312 aaKnown RBP10.72□□□□□ -0.69
NDE1-207ENST00000573203 CHMP4CQ96CF2 233 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 FEM1BQ9UK73 627 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 TACC3Q9Y6A5 838 aa10.72□□□□□ -0.69
NDE1-207ENST00000573203 ZNF213O14771 459 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 ZBED4O75132 1171 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 FARP2O94887 1054 aaPredicted RBP10.71□□□□□ -0.69
NDE1-207ENST00000573203 HOXC6P09630 235 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 FCER1AP12319 257 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 COPB2P35606 906 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 CACNB2Q08289 660 aaPredicted RBP10.71□□□□□ -0.69
NDE1-207ENST00000573203 IKQ13123 557 aaPredicted RBP10.71□□□□□ -0.69
NDE1-207ENST00000573203 AKNAD1Q5T1N1 836 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 MAP3K21Q5TCX8 1036 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 PRPF38BQ5VTL8 546 aaKnown RBP10.71□□□□□ -0.69
NDE1-207ENST00000573203 MFSD6Q6ZSS7 791 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 RIOX2Q8IUF8 465 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 ABRAQ8N0Z2 381 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 REPS2Q8NFH8 660 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 NPLOC4Q8TAT6 608 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 STAG1Q8WVM7 1258 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 KIFC2Q96AC6 838 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 DSCC1Q9BVC3 393 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 RNF41Q9H4P4 317 aaPredicted RBP10.71□□□□□ -0.69
NDE1-207ENST00000573203 IL17RBQ9NRM6 502 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 SLC5A4Q9NY91 659 aa10.71□□□□□ -0.69
NDE1-207ENST00000573203 FLRT1Q9NZU1 646 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms