RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 ZNF335Q9H4Z2 1342 aaPredicted RBP9.02□□□□□ -0.97
CNOT1-222ENST00000570139 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 GFRA2O00451 464 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 SUSD5O60279 629 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 NME1P15531 152 aaKnown RBP9.01□□□□□ -0.97
CNOT1-222ENST00000570139 ITGA6P23229 1130 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 SOX5P35711 763 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 STAT3P40763 770 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 TNNT2P45379 298 aaPredicted RBP9.01□□□□□ -0.97
CNOT1-222ENST00000570139 ARL4DP49703 201 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 CT47A1Q5JQC4 288 aaPredicted RBP9.01□□□□□ -0.97
CNOT1-222ENST00000570139 UNC5AQ6ZN44 842 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 NLRC3Q7RTR2 1065 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 KCNH5Q8NCM2 988 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 GPBAR1Q8TDU6 330 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 SGSM3Q96HU1 749 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 CORO1BQ9BR76 489 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 CAAP1Q9H8G2 361 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 LTN1O94822 1766 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 IQSEC2Q5JU85 1478 aa9.01□□□□□ -0.97
CNOT1-222ENST00000570139 FLT4P35916 1363 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 TNFRSF10CO14798 259 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 RFPL3O75679 317 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 DGAT1O75907 488 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 FAM153BP0C7A2 387 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 NAT2P11245 290 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 PLCG1P19174 1290 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 CTBSQ01459 385 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 EXOSC10Q01780 885 aaKnown RBP9□□□□□ -0.97
CNOT1-222ENST00000570139 GSTM4Q03013 218 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 SLC10A6Q3KNW5 377 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 PKDCCQ504Y2 493 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 ATG4CQ96DT6 458 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 PLPPR2Q96GM1 343 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 PSMD1Q99460 953 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 SH2B1Q9NRF2 756 aaPredicted RBP9□□□□□ -0.97
CNOT1-222ENST00000570139 MCM8Q9UJA3 840 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 ADAMTS8Q9UP79 889 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 LTBP4Q8N2S1 1624 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 PXDNQ92626 1479 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 NFAT5O94916 1531 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 RGPD1P0DJD0 1748 aa9□□□□□ -0.97
CNOT1-222ENST00000570139 ARHGEF10O15013 1369 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 SOX1O00570 391 aaPredicted RBP8.99□□□□□ -0.97
CNOT1-222ENST00000570139 EIF5BO60841 1220 aaKnown RBP8.99□□□□□ -0.97
CNOT1-222ENST00000570139 MYCLP1P12525 358 aaPredicted RBP8.99□□□□□ -0.97
CNOT1-222ENST00000570139 BMP4P12644 408 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 EPHA1P21709 976 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 ADH7P40394 386 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 SLC7A5Q01650 507 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 CDCP2Q5VXM1 449 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 MPRIPQ6WCQ1 1025 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 CERS3Q8IU89 383 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 TTC9Q92623 222 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 WNT8BQ93098 351 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 ELMO3Q96BJ8 720 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 IER2Q9BTL4 223 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 CNNM2Q9H8M5 875 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 POLKQ9UBT6 870 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 NAGPAQ9UK23 515 aa8.99□□□□□ -0.97
CNOT1-222ENST00000570139 PEAK1Q9H792 1746 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 CRYBG1Q9Y4K1 1723 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 ALG1L2C9J202 215 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 ADCY3O60266 1144 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 NEFMP07197 916 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 ACRP10323 421 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 PMLP29590 882 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 PIP4K2BP78356 416 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 BBS9Q3SYG4 887 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 TMEM201Q5SNT2 666 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 GDF6Q6KF10 455 aaPredicted RBP8.98□□□□□ -0.97
CNOT1-222ENST00000570139 KIAA1211LQ6NV74 962 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 FAM117BQ6P1L5 589 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 THNSL2Q86YJ6 484 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 RUNDC1Q96C34 613 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 IPO9Q96P70 1041 aaKnown RBP8.98□□□□□ -0.97
CNOT1-222ENST00000570139 LPIN3Q9BQK8 851 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 MAGEC2Q9UBF1 373 aaPredicted RBP8.98□□□□□ -0.97
CNOT1-222ENST00000570139 TCEAL9Q9UHQ7 104 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 ADAM30Q9UKF2 790 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 USP19O94966 1318 aa8.98□□□□□ -0.97
CNOT1-222ENST00000570139 FAM208AQ9UK61 1670 aaKnown RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 CCDC194A0A1B0GVG4 234 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 SOBPA7XYQ1 873 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 ADARB2-AS1A8MUL3 147 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 KCNQ2O43526 872 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 CDK8P49336 464 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 ZNF143P52747 638 aaPredicted RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 PCBP4P57723 403 aaKnown RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 C19orf57Q0VDD7 668 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 PABPC4Q13310 644 aaKnown RBP eCLIP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 POU4F3Q15319 338 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 HP1BP3Q5SSJ5 553 aaPredicted RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 LRFN4Q6PJG9 635 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 KRT28Q7Z3Y7 464 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 FMNL3Q8IVF7 1028 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms