RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
SPG7-218ENST00000568205 SYDE2Q5VT97 1194 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 SAMD1Q6SPF0 538 aaPredicted RBP18.29■□□□□ 0.52
SPG7-218ENST00000568205 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 PRPF38AQ8NAV1 312 aaKnown RBP18.29■□□□□ 0.52
SPG7-218ENST00000568205 KIFC2Q96AC6 838 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 LZTS2Q9BRK4 669 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 FAM217BQ9NTX9 383 aaPredicted RBP18.29■□□□□ 0.52
SPG7-218ENST00000568205 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
SPG7-218ENST00000568205 CCDC196A0A1B0GTZ2 297 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 SPDYE16A6NNV3 312 aaPredicted RBP18.28■□□□□ 0.52
SPG7-218ENST00000568205 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 LARGE1O95461 756 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 CDC27P30260 824 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 HERVK_113P62684 666 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 CCT2P78371 535 aaKnown RBP18.28■□□□□ 0.52
SPG7-218ENST00000568205 STK3Q13188 491 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 ME3Q16798 604 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 ATG4CQ96DT6 458 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
SPG7-218ENST00000568205 UBA5Q9GZZ9 404 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 SLKQ9H2G2 1235 aaPredicted RBP18.28■□□□□ 0.52
SPG7-218ENST00000568205 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
SPG7-218ENST00000568205 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
SPG7-218ENST00000568205 ADD1P35611 737 aaKnown RBP18.27■□□□□ 0.52
SPG7-218ENST00000568205 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.52
SPG7-218ENST00000568205 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
SPG7-218ENST00000568205 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.52
SPG7-218ENST00000568205 ZFYVE28Q9HCC9 887 aa18.27■□□□□ 0.52
SPG7-218ENST00000568205 PRR12Q9ULL5 1215 aa18.27■□□□□ 0.52
SPG7-218ENST00000568205 CA12O43570 354 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 DHX16O60231 1041 aaKnown RBP18.26■□□□□ 0.51
SPG7-218ENST00000568205 SMARCA1P28370 1054 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 SCRN1Q12765 414 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 NBPF11Q86T75 865 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 SRBD1Q8N5C6 995 aaKnown RBP18.26■□□□□ 0.51
SPG7-218ENST00000568205 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 GTF3C2Q8WUA4 911 aaPredicted RBP18.26■□□□□ 0.51
SPG7-218ENST00000568205 GTF3C6Q969F1 213 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 SH2B1Q9NRF2 756 aaPredicted RBP18.26■□□□□ 0.51
SPG7-218ENST00000568205 RNF186Q9NXI6 227 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 ADAMTS5Q9UNA0 930 aa18.26■□□□□ 0.51
SPG7-218ENST00000568205 ADGRA2Q96PE1 1338 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 VWA5AO00534 786 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 FDX1P10109 184 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
SPG7-218ENST00000568205 MAP2K1Q02750 393 aaPredicted RBP18.25■□□□□ 0.51
SPG7-218ENST00000568205 CRHR2Q13324 411 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 POTEEQ6S8J3 1075 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 CMTR1Q8N1G2 835 aaKnown RBP18.25■□□□□ 0.51
SPG7-218ENST00000568205 MB21D1Q8N884 522 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 SNX21Q969T3 373 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 JMJD4Q9H9V9 463 aa18.25■□□□□ 0.51
SPG7-218ENST00000568205 CPLX1O14810 134 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 CYTH3O43739 400 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 ZBED4O75132 1171 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 FUT2Q10981 343 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 TMX3Q96JJ7 454 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 CFHR5Q9BXR6 569 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 RANBP17Q9H2T7 1088 aaKnown RBP18.24■□□□□ 0.51
SPG7-218ENST00000568205 SLC38A10Q9HBR0 1119 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 VAT1LQ9HCJ6 419 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 RBPJLQ9UBG7 517 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
SPG7-218ENST00000568205 CTDP1Q9Y5B0 961 aaPredicted RBP18.24■□□□□ 0.51
SPG7-218ENST00000568205 CNTNAP5Q8WYK1 1306 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 TLR2O60603 784 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 TRPA1O75762 1119 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 IFNAR1P17181 557 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 SNAP25P60880 206 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 NTRK3Q16288 839 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
SPG7-218ENST00000568205 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 MTMR8Q96EF0 704 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 PAGR1Q9BTK6 254 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 SAGE1Q9NXZ1 904 aa18.23■□□□□ 0.51
SPG7-218ENST00000568205 CNMDO75829 334 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
SPG7-218ENST00000568205 CCDC174Q6PII3 467 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 RRP36Q96EU6 259 aaKnown RBP18.22■□□□□ 0.51
SPG7-218ENST00000568205 PIGSQ96S52 555 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 BEGAINQ9BUH8 593 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 R3HDMLQ9H3Y0 253 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 BTBD7Q9P203 1132 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 MORF4L1Q9UBU8 362 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
SPG7-218ENST00000568205 ZBTB5O15062 677 aa18.21■□□□□ 0.51
SPG7-218ENST00000568205 PEX10O60683 326 aa18.21■□□□□ 0.51
SPG7-218ENST00000568205 CDKL5O76039 1030 aa18.21■□□□□ 0.51
SPG7-218ENST00000568205 TBC1D8O95759 1140 aa18.21■□□□□ 0.51
SPG7-218ENST00000568205 BCRP11274 1271 aa18.21■□□□□ 0.51
SPG7-218ENST00000568205 OAZ1P54368 228 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms