RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 GRM1Q13255 1194 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 KCTD1Q719H9 257 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 FANCBQ8NB91 859 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 LPAR1Q92633 364 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 FAM217BQ9NTX9 383 aaPredicted RBP13.52□□□□□ -0.25
HERC1-214ENST00000561400 MAD2L2Q9UI95 211 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 FRMPD2Q68DX3 1309 aaPredicted RBP13.52□□□□□ -0.25
HERC1-214ENST00000561400 CDC27P30260 824 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 GTF2A2P52657 109 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 GRM4Q14833 912 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 TREML2Q5T2D2 321 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 GADL1Q6ZQY3 521 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 DCAF4Q8WV16 495 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 BRI3BPQ8WY22 251 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 MAP3K14Q99558 947 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 NCOA5Q9HCD5 579 aaKnown RBP13.51□□□□□ -0.25
HERC1-214ENST00000561400 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
HERC1-214ENST00000561400 CCL15-CCL14A0A0B4J2E2 113 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
HERC1-214ENST00000561400 CALM1P0DP23 149 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 CALM2P0DP24 149 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 CALM3P0DP25 149 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 BMP3P12645 472 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 ADD1P35611 737 aaKnown RBP13.51□□□□□ -0.25
HERC1-214ENST00000561400 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
HERC1-214ENST00000561400 RCAN1P53805 252 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 CCL15Q16663 113 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 NECAB1Q8N987 351 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
HERC1-214ENST00000561400 SNX21Q969T3 373 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 CPVLQ9H3G5 476 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 GPCPD1Q9NPB8 672 aa13.51□□□□□ -0.25
HERC1-214ENST00000561400 NID2Q14112 1375 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 GOLGA8AA7E2F4 631 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
HERC1-214ENST00000561400 PFKFB2O60825 505 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 PARP1P09874 1014 aaKnown RBP13.5□□□□□ -0.25
HERC1-214ENST00000561400 CETPP11597 493 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 HSPA6P17066 643 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 MCM2P49736 904 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 SCRN1Q12765 414 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 GPAT2Q6NUI2 795 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
HERC1-214ENST00000561400 CTCFLQ8NI51 663 aaPredicted RBP13.5□□□□□ -0.25
HERC1-214ENST00000561400 TMX3Q96JJ7 454 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 PTPN18Q99952 460 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 RPAP3Q9H6T3 665 aaPredicted RBP13.5□□□□□ -0.25
HERC1-214ENST00000561400 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
HERC1-214ENST00000561400 CEP350Q5VT06 3117 aa13.5□□□□□ -0.25
HERC1-214ENST00000561400 DTNBO60941 627 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 RTN1Q16799 776 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 SLC35G1Q2M3R5 365 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 FASTKD5Q7L8L6 764 aaKnown RBP13.49□□□□□ -0.25
HERC1-214ENST00000561400 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
HERC1-214ENST00000561400 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
HERC1-214ENST00000561400 FBXO28Q9NVF7 368 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
HERC1-214ENST00000561400 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
HERC1-214ENST00000561400 TMEM232C9JQI7 657 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 XRCC6P12956 609 aaKnown RBP eCLIP13.49□□□□□ -0.256e-9■□□□□ 9.9
HERC1-214ENST00000561400 SLC16A2P36021 539 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
HERC1-214ENST00000561400 TANGO6Q9C0B7 1094 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 UBA5Q9GZZ9 404 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 AGTPBP1Q9UPW5 1226 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 MYH6P13533 1939 aa13.49□□□□□ -0.25
HERC1-214ENST00000561400 MANSC4A6NHS7 340 aaPredicted RBP13.48□□□□□ -0.25
HERC1-214ENST00000561400 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 AOC2O75106 756 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 KIF5BP33176 963 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 COL11A1P12107 1806 aaPredicted RBP13.48□□□□□ -0.25
HERC1-214ENST00000561400 TTC36A6NLP5 189 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
HERC1-214ENST00000561400 CYTH3O43739 400 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
HERC1-214ENST00000561400 VEGFBP49765 207 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 STAT2P52630 851 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
HERC1-214ENST00000561400 NOGQ13253 232 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 NTRK3Q16288 839 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 CATSPERGQ6ZRH7 1159 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
HERC1-214ENST00000561400 SH2B1Q9NRF2 756 aaPredicted RBP13.48□□□□□ -0.25
HERC1-214ENST00000561400 SMCHD1A6NHR9 2005 aa13.48□□□□□ -0.25
HERC1-214ENST00000561400 USP17L15C9J2P7 530 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms