RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 MBIPQ9NS73 344 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 MSRAQ9UJ68 235 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 CDV3Q9UKY7 258 aaKnown RBP6.7□□□□□ -1.34
HERC1-213ENST00000561359 SUGT1Q9Y2Z0 365 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 DAGLAQ9Y4D2 1042 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 GPSM3Q9Y4H4 160 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 UTYO14607 1347 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
HERC1-213ENST00000561359 PTPRZ1P23471 2315 aaPredicted RBP6.69□□□□□ -1.34
HERC1-213ENST00000561359 PI4K2BG5E9Z4 385 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 PQBP1O60828 265 aaKnown RBP6.69□□□□□ -1.34
HERC1-213ENST00000561359 SLURP2P0DP57 97 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 ZEB1P37275 1124 aaPredicted RBP6.69□□□□□ -1.34
HERC1-213ENST00000561359 CASP7P55210 303 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 ATP2B2Q01814 1243 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 TRIM26Q12899 539 aaPredicted RBP6.69□□□□□ -1.34
HERC1-213ENST00000561359 SNX17Q15036 470 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 RAB30Q15771 203 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 WDR78Q5VTH9 848 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 ANO1Q5XXA6 986 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 FBXO33Q7Z6M2 555 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 ZNF280CQ8ND82 737 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 ADAM32Q8TC27 787 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 HERVK_113Q902F9 699 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 EDC3Q96F86 508 aaKnown RBP6.69□□□□□ -1.34
HERC1-213ENST00000561359 ZFP42Q96MM3 310 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 PURBQ96QR8 312 aaKnown RBP6.69□□□□□ -1.34
HERC1-213ENST00000561359 KCTD15Q96SI1 283 aaPredicted RBP6.69□□□□□ -1.34
HERC1-213ENST00000561359 PAGR1Q9BTK6 254 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 CHMP4AQ9BY43 222 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 PORCNQ9H237 461 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 SLC28A3Q9HAS3 691 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 TXNRD2Q9NNW7 524 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 TMEM39AQ9NV64 488 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 MYH3P11055 1940 aa6.69□□□□□ -1.34
HERC1-213ENST00000561359 KIAA0355O15063 1070 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 GLRX3O76003 335 aaKnown RBP6.68□□□□□ -1.34
HERC1-213ENST00000561359 CYP2C19P33261 490 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 RGS3P49796 1198 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 HERVK_113P62684 666 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 ERVK-9P63128 1117 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 ERVK-24P63145 666 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 C6orf118Q5T5N4 469 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 C1orf53Q5VUE5 145 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 CCDC174Q6PII3 467 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 LMBR1LQ6UX01 489 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 CCDC146Q8IYE0 955 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.68□□□□□ -1.344e-9■□□□□ 8.8
HERC1-213ENST00000561359 KLF16Q9BXK1 252 aaPredicted RBP6.68□□□□□ -1.34
HERC1-213ENST00000561359 NKX2-4Q9H2Z4 354 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 FLRT1Q9NZU1 646 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 NDUFB9Q9Y6M9 179 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 ATRNL1Q5VV63 1379 aa6.68□□□□□ -1.34
HERC1-213ENST00000561359 SPTBN4Q9H254 2564 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 C5orf42Q9H799 3197 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 BMP2P12643 396 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 RAB15P59190 212 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 FOXO4P98177 505 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 MAP3K10Q02779 954 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 PPIGQ13427 754 aaKnown RBP eCLIP6.67□□□□□ -1.34
HERC1-213ENST00000561359 LRRC41Q15345 812 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 NBPF20Q3BBV1 942 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 SLC44A5Q8NCS7 719 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 TRPV1Q8NER1 839 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 STK31Q9BXU1 1019 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 KCNH6Q9H252 994 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.67□□□□□ -1.34
HERC1-213ENST00000561359 PGPEP1Q9NXJ5 209 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 TMOD4Q9NZQ9 345 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 RBPJLQ9UBG7 517 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 COG5Q9UP83 839 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 IVNS1ABPQ9Y6Y0 642 aa6.67□□□□□ -1.34
HERC1-213ENST00000561359 PRRC2BQ5JSZ5 2229 aaKnown RBP6.66□□□□□ -1.34
HERC1-213ENST00000561359 CACNA1BQ00975 2339 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 USP34Q70CQ2 3546 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 DDTLA6NHG4 134 aaPredicted RBP6.66□□□□□ -1.34
HERC1-213ENST00000561359 SLC15A5A6NIM6 579 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 FAM196BA6NMK8 535 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 USP17L5A8MUK1 530 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 DCDC2CA8MYV0 355 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 APBB1O00213 710 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 ENTPD3O75355 529 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 WFS1O76024 890 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 CYBAP13498 195 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 CCNA1P78396 465 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 DHX9Q08211 1270 aaKnown RBP6.66□□□□□ -1.34
HERC1-213ENST00000561359 TMEM240Q5SV17 173 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 PPP1R26Q5T8A7 1209 aaPredicted RBP6.66□□□□□ -1.34
HERC1-213ENST00000561359 C8orf58Q8NAV2 365 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 WDR66Q8TBY9 1149 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 GTF3C2Q8WUA4 911 aaPredicted RBP6.66□□□□□ -1.34
HERC1-213ENST00000561359 TRIM34Q9BYJ4 488 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 PUS3Q9BZE2 481 aaKnown RBP6.66□□□□□ -1.34
HERC1-213ENST00000561359 AS3MTQ9HBK9 375 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 CD320Q9NPF0 282 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 ZFHX2Q9C0A1 2572 aaPredicted RBP6.66□□□□□ -1.34
HERC1-213ENST00000561359 PLXNB2O15031 1838 aa6.66□□□□□ -1.34
HERC1-213ENST00000561359 SEPT4O43236 478 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms