RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 EIF4A3P38919 411 aaKnown RBP6.19□□□□□ -1.42
LRRC28-218ENST00000560236 RTP1P59025 263 aa6.19□□□□□ -1.42
LRRC28-218ENST00000560236 BBS9Q3SYG4 887 aa6.19□□□□□ -1.42
LRRC28-218ENST00000560236 OVOS1Q6IE37 1185 aa6.19□□□□□ -1.42
LRRC28-218ENST00000560236 ZPBP2Q6X784 338 aa6.19□□□□□ -1.42
LRRC28-218ENST00000560236 MARCH10Q8NA82 808 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-218ENST00000560236 PANK1Q8TE04 598 aa6.19□□□□□ -1.42
LRRC28-218ENST00000560236 A0A0G2JLL6 359 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-218ENST00000560236 SIGLEC6O43699 453 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 TRIM13O60858 407 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 CLEC3AO75596 197 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 VIPR1P32241 457 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 EPHB3P54753 998 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 CDCP2Q5VXM1 449 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 OLFML2BQ68BL8 750 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 PLCD4Q9BRC7 762 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 PRDM14Q9GZV8 571 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 CNNM2Q9H8M5 875 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 CNTD2Q9H8S5 307 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 KCNQ5Q9NR82 932 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 TNFRSF10DQ9UBN6 386 aa6.18□□□□□ -1.42
LRRC28-218ENST00000560236 ABLIM1O14639 778 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 N4BP3O15049 544 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 FOXD2O60548 495 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-218ENST00000560236 GREM1O60565 184 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 YBX1P67809 324 aaKnown RBP6.17□□□□□ -1.42
LRRC28-218ENST00000560236 ZNF296Q8WUU4 475 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-218ENST00000560236 ATG4CQ96DT6 458 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 ZNF512BQ96KM6 892 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-218ENST00000560236 FCRL2Q96LA5 508 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-218ENST00000560236 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 EHMT1Q9H9B1 1298 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 CHST7Q9NS84 486 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 TAF6LQ9Y6J9 622 aa6.17□□□□□ -1.42
LRRC28-218ENST00000560236 WTIPA6NIX2 430 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-218ENST00000560236 SASH1O94885 1247 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 MPOP05164 745 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 ARL4AP40617 200 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 CCNFP41002 786 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 CRKP46108 304 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 AFF3P51826 1226 aaKnown RBP6.16□□□□□ -1.42
LRRC28-218ENST00000560236 ERVFRD-1P60508 538 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 NFIXQ14938 502 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 GALNT18Q6P9A2 607 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 NLRC3Q7RTR2 1065 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 DACT3Q96B18 629 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-218ENST00000560236 MINPP1Q9UNW1 487 aa6.16□□□□□ -1.42
LRRC28-218ENST00000560236 FADS2P1A8MWK0 482 aa6.15□□□□□ -1.42
LRRC28-218ENST00000560236 MEIS1O00470 390 aa6.15□□□□□ -1.42
LRRC28-218ENST00000560236 ENDOUP21128 410 aaKnown RBP6.15□□□□□ -1.42
LRRC28-218ENST00000560236 HSF5Q4G112 596 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-218ENST00000560236 SEZ6Q53EL9 994 aa6.15□□□□□ -1.42
LRRC28-218ENST00000560236 MZB1Q8WU39 189 aa6.15□□□□□ -1.42
LRRC28-218ENST00000560236 CDADC1Q9BWV3 514 aa6.15□□□□□ -1.42
LRRC28-218ENST00000560236 MKRN2Q9H000 416 aaKnown RBP6.15□□□□□ -1.42
LRRC28-218ENST00000560236 GPR55Q9Y2T6 319 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-218ENST00000560236 PDIA4P13667 645 aaKnown RBP6.14□□□□□ -1.43
LRRC28-218ENST00000560236 SYN1P17600 705 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 ERCC3P19447 782 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 MCM4P33991 863 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 CDR1P51861 262 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 CLCQ05315 142 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 LAPTM5Q13571 262 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 GK5Q6ZS86 529 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 GFOD1Q9NXC2 390 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 RTEL1Q9NZ71 1219 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 UBP1Q9NZI7 540 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 GGT7Q9UJ14 662 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 FBXL21Q9UKT6 434 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 PCDHB12Q9Y5F1 795 aa6.14□□□□□ -1.43
LRRC28-218ENST00000560236 IRS4O14654 1257 aaPredicted RBP6.13□□□□□ -1.43
LRRC28-218ENST00000560236 PRKCAP17252 672 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 BMP8BP34820 402 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 TMEM62Q0P6H9 643 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 APOBRQ0VD83 1088 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 LRRFIP1Q32MZ4 808 aaKnown RBP6.13□□□□□ -1.43
LRRC28-218ENST00000560236 CNKSR3Q6P9H4 555 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 TMC6Q7Z403 805 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 SLCO6A1Q86UG4 719 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 TMEM192Q8IY95 271 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 REXO1Q8N1G1 1221 aaKnown RBP6.13□□□□□ -1.43
LRRC28-218ENST00000560236 XYLT2Q9H1B5 865 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 EPB41L4AQ9HCS5 686 aaPredicted RBP6.13□□□□□ -1.43
LRRC28-218ENST00000560236 ERVK13-1Q9NX77 482 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 KLHL14Q9P2G3 628 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 ADAMTS1Q9UHI8 967 aa6.13□□□□□ -1.43
LRRC28-218ENST00000560236 A0A1W2PQ45 241 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-218ENST00000560236 A0A1W2PQY0 241 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 NUDT19A8MXV4 375 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 ZNF205O95201 554 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 NME1P15531 152 aaKnown RBP6.12□□□□□ -1.43
LRRC28-218ENST00000560236 ZNF165P49910 485 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 CYP4F8P98187 520 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 ERCC6Q03468 1493 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 RAB3GAP1Q15042 981 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 VMACQ2NL98 169 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 HS2ST1Q7LGA3 356 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 LDHDQ86WU2 507 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms