RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 RIOX1Q9H6W3 641 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 SH3GLB2Q9NR46 395 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 CHMP5Q9NZZ3 219 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 CTDP1Q9Y5B0 961 aaPredicted RBP14.35□□□□□ -0.11
TPM1-209ENST00000558072 FRMPD2Q68DX3 1309 aaPredicted RBP14.35□□□□□ -0.11
TPM1-209ENST00000558072 MYPNQ86TC9 1320 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 H3BQV1 296 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 SLC10A3P09131 477 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 CETPP11597 493 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 SAFBQ15424 915 aaKnown RBP eCLIP14.34□□□□□ -0.11
TPM1-209ENST00000558072 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 SPRYD7Q5W111 196 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 GALNT17Q6IS24 598 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 SRBD1Q8N5C6 995 aaKnown RBP14.34□□□□□ -0.11
TPM1-209ENST00000558072 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 GTF3C2Q8WUA4 911 aaPredicted RBP14.34□□□□□ -0.11
TPM1-209ENST00000558072 CCDC102AQ96A19 550 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 CPVLQ9H3G5 476 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 BRMS1Q9HCU9 246 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 EMILIN3Q9NT22 766 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 HOXC10Q9NYD6 342 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 ATP6V1DQ9Y5K8 247 aa14.34□□□□□ -0.11
TPM1-209ENST00000558072 WDR33Q9C0J8 1336 aaKnown RBP14.34□□□□□ -0.11
TPM1-209ENST00000558072 A0A0G2JLL6 359 aaPredicted RBP14.33□□□□□ -0.12
TPM1-209ENST00000558072 PNMA6FA0A0J9YX94 578 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 PPFIA3O75145 1194 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 CTDNEP1O95476 244 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 CALML3P27482 149 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 INHBEP58166 350 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 MOGSQ13724 837 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.12
TPM1-209ENST00000558072 TREML2Q5T2D2 321 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 SYDE2Q5VT97 1194 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
TPM1-209ENST00000558072 GADL1Q6ZQY3 521 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 PRRT2Q7Z6L0 340 aaPredicted RBP14.33□□□□□ -0.12
TPM1-209ENST00000558072 NBPF11Q86T75 865 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 C8orf76Q96K31 380 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 PNMA3Q9UL41 463 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
TPM1-209ENST00000558072 PARP14Q460N5 1801 aa14.33□□□□□ -0.12
TPM1-209ENST00000558072 ZBTB5O15062 677 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 PEX10O60683 326 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 ZBED4O75132 1171 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 PLEKHA8P1O95397 391 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 GOLGA8HP0CJ92 632 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 SCG2P13521 617 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
TPM1-209ENST00000558072 VCAM1P19320 739 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 OSBPP22059 807 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 HOXA7P31268 230 aaPredicted RBP14.32□□□□□ -0.12
TPM1-209ENST00000558072 FUT2Q10981 343 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 ST3GAL1Q11201 340 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 FAM83BQ5T0W9 1011 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 MCTP2Q6DN12 878 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 PPP1R18Q6NYC8 613 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 KCTD1Q719H9 257 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
TPM1-209ENST00000558072 STAG2Q8N3U4 1231 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 SPRYD3Q8NCJ5 442 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 BRI3BPQ8WY22 251 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 CAPNS2Q96L46 248 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 SLF1Q9BQI6 1058 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 MAF1Q9H063 256 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 SLC45A1Q9Y2W3 748 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
TPM1-209ENST00000558072 THSD7BQ9C0I4 1608 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 MANSC4A6NHS7 340 aaPredicted RBP14.31□□□□□ -0.12
TPM1-209ENST00000558072 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 STX6O43752 255 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 JAK2O60674 1132 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 VEGFBP49765 207 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 SNAP25P60880 206 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 COG2Q14746 738 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 OTUD7BQ6GQQ9 843 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 TTBK2Q6IQ55 1244 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 ADGRF4Q8IZF3 695 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 CCDC82Q8N4S0 544 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 MB21D1Q8N884 522 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 PHKBQ93100 1093 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 MTMR8Q96EF0 704 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 MS4A4AQ96JQ5 239 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms