RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 DDX20Q9UHI6 824 aaKnown RBP16.6■□□□□ 0.25
DDX54-210ENST00000552375 ANAPC4Q9UJX5 808 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 ZMYM6O95789 1325 aa16.6■□□□□ 0.25
DDX54-210ENST00000552375 HIP1O00291 1037 aa16.59■□□□□ 0.25
DDX54-210ENST00000552375 MMP19Q99542 508 aa16.59■□□□□ 0.25
DDX54-210ENST00000552375 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
DDX54-210ENST00000552375 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
DDX54-210ENST00000552375 PFASO15067 1338 aa16.59■□□□□ 0.25
DDX54-210ENST00000552375 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 ORC4O43929 436 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 COL6A1P12109 1028 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 KCTD2Q14681 263 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 PRPF38AQ8NAV1 312 aaKnown RBP16.58■□□□□ 0.24
DDX54-210ENST00000552375 TRPV1Q8NER1 839 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 MAML3Q96JK9 1138 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 TOMM22Q9NS69 142 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 LAMA3Q16787 3333 aa16.58■□□□□ 0.24
DDX54-210ENST00000552375 ATP2A1O14983 1001 aa16.57■□□□□ 0.24
DDX54-210ENST00000552375 FGAP02671 866 aa16.57■□□□□ 0.24
DDX54-210ENST00000552375 MFAP1P55081 439 aaKnown RBP16.57■□□□□ 0.24
DDX54-210ENST00000552375 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
DDX54-210ENST00000552375 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
DDX54-210ENST00000552375 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
DDX54-210ENST00000552375 KIFC2Q96AC6 838 aa16.57■□□□□ 0.24
DDX54-210ENST00000552375 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
DDX54-210ENST00000552375 FEM1BQ9UK73 627 aa16.57■□□□□ 0.24
DDX54-210ENST00000552375 STX8Q9UNK0 236 aa16.57■□□□□ 0.24
DDX54-210ENST00000552375 FGRP09769 529 aa16.56■□□□□ 0.24
DDX54-210ENST00000552375 BMP3P12645 472 aa16.56■□□□□ 0.24
DDX54-210ENST00000552375 CNGA1P29973 690 aa16.56■□□□□ 0.24
DDX54-210ENST00000552375 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
DDX54-210ENST00000552375 SLC38A10Q9HBR0 1119 aa16.56■□□□□ 0.24
DDX54-210ENST00000552375 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
DDX54-210ENST00000552375 ZBED4O75132 1171 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 PGK2P07205 417 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 CHMLP26374 656 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 SLC1A4P43007 532 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 STAT2P52630 851 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 OAZ1P54368 228 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 ZNF792Q3KQV3 632 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 C7orf61Q8IZ16 206 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 PRO3102Q9H379 93 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 NRBP1Q9UHY1 535 aa16.55■□□□□ 0.24
DDX54-210ENST00000552375 DIS3Q9Y2L1 958 aaKnown RBP16.55■□□□□ 0.24
DDX54-210ENST00000552375 CTDP1Q9Y5B0 961 aaPredicted RBP16.55■□□□□ 0.24
DDX54-210ENST00000552375 NEDD4P46934 1319 aa16.54■□□□□ 0.24
DDX54-210ENST00000552375 RAD50Q92878 1312 aa16.54■□□□□ 0.24
DDX54-210ENST00000552375 SEPT4O43236 478 aa16.54■□□□□ 0.24
DDX54-210ENST00000552375 NMT2O60551 498 aa16.54■□□□□ 0.24
DDX54-210ENST00000552375 NOVP48745 357 aa16.54■□□□□ 0.24
DDX54-210ENST00000552375 FXR1P51114 621 aaKnown RBP eCLIP16.54■□□□□ 0.24
DDX54-210ENST00000552375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
DDX54-210ENST00000552375 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
DDX54-210ENST00000552375 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
DDX54-210ENST00000552375 RIPK3Q9Y572 518 aa16.54■□□□□ 0.24
DDX54-210ENST00000552375 TMEM232C9JQI7 657 aa16.53■□□□□ 0.24
DDX54-210ENST00000552375 DNM1LO00429 736 aa16.53■□□□□ 0.24
DDX54-210ENST00000552375 FDX1P10109 184 aa16.53■□□□□ 0.24
DDX54-210ENST00000552375 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
DDX54-210ENST00000552375 CPXCR1Q8N123 301 aa16.53■□□□□ 0.24
DDX54-210ENST00000552375 TINF2Q9BSI4 451 aa16.53■□□□□ 0.24
DDX54-210ENST00000552375 RAVER2Q9HCJ3 691 aaKnown RBP16.53■□□□□ 0.24
DDX54-210ENST00000552375 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
DDX54-210ENST00000552375 PLA2G6O60733 806 aa16.52■□□□□ 0.24
DDX54-210ENST00000552375 MCCP23508 829 aa16.52■□□□□ 0.24
DDX54-210ENST00000552375 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
DDX54-210ENST00000552375 RASGRP2Q7LDG7 609 aa16.52■□□□□ 0.24
DDX54-210ENST00000552375 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
DDX54-210ENST00000552375 STAG1Q8WVM7 1258 aa16.52■□□□□ 0.24
DDX54-210ENST00000552375 FBXO40Q9UH90 709 aa16.52■□□□□ 0.24
DDX54-210ENST00000552375 ALPK3Q96L96 1907 aa16.52■□□□□ 0.23
DDX54-210ENST00000552375 ZNFX1Q9P2E3 1918 aaKnown RBP16.52■□□□□ 0.23
DDX54-210ENST00000552375 FRMPD3Q5JV73 1810 aa16.52■□□□□ 0.23
DDX54-210ENST00000552375 SZT2Q5T011 3432 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 PLXNA1Q9UIW2 1896 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 DNAJC25-GNG10A0A024R161 153 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 PTH1RQ03431 593 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 LRRC26Q2I0M4 334 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 PRAMEF19Q5SWL8 479 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 AKNAD1Q5T1N1 836 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 KCTD1Q719H9 257 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 CHST13Q8NET6 341 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 RUFY2Q8WXA3 655 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 DSCC1Q9BVC3 393 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
DDX54-210ENST00000552375 TCP11L1Q9NUJ3 509 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 ZMYND8Q9ULU4 1186 aaPredicted RBP16.51■□□□□ 0.23
DDX54-210ENST00000552375 MTMR7Q9Y216 660 aa16.51■□□□□ 0.23
DDX54-210ENST00000552375 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 ZNF213O14771 459 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 ANO1Q5XXA6 986 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 ARRDC4Q8NCT1 418 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms