RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ASPRV1Q53RT3 343 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
RAB5C-206ENST00000550406 FANCBQ8NB91 859 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 PARK7Q99497 189 aaKnown RBP15.23■□□□□ 0.03
RAB5C-206ENST00000550406 SLF1Q9BQI6 1058 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 UBA5Q9GZZ9 404 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 ZFYVE28Q9HCC9 887 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 SAGE1Q9NXZ1 904 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 HOXC10Q9NYD6 342 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 BTBD7Q9P203 1132 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 CPA4Q9UI42 421 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 PNMA3Q9UL41 463 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 TPCN1Q9ULQ1 816 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 ZNFX1Q9P2E3 1918 aaKnown RBP15.22■□□□□ 0.03
RAB5C-206ENST00000550406 ZBTB43O43298 467 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 PDIA3P30101 505 aaKnown RBP15.22■□□□□ 0.03
RAB5C-206ENST00000550406 CDC27P30260 824 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 STAT2P52630 851 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 SNAP25P60880 206 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 RABEP1Q15276 862 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 GPATCH4Q5T3I0 446 aaKnown RBP15.22■□□□□ 0.03
RAB5C-206ENST00000550406 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
RAB5C-206ENST00000550406 FAM160B2Q86V87 743 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 MICU3Q86XE3 530 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 CHURC1Q8WUH1 139 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 KIFC2Q96AC6 838 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 PRR12Q9ULL5 1215 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 NID2Q14112 1375 aa15.22■□□□□ 0.03
RAB5C-206ENST00000550406 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 VWA5AO00534 786 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CYTH3O43739 400 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 PLEKHA8P1O95397 391 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CD2BP2O95400 341 aaKnown RBP15.21■□□□□ 0.03
RAB5C-206ENST00000550406 LARGE1O95461 756 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CALM1P0DP23 149 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CALM2P0DP24 149 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CALM3P0DP25 149 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CAP1Q01518 475 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 SYDE2Q5VT97 1194 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CMTR1Q8N1G2 835 aaKnown RBP15.21■□□□□ 0.03
RAB5C-206ENST00000550406 SRBD1Q8N5C6 995 aaKnown RBP15.21■□□□□ 0.03
RAB5C-206ENST00000550406 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 ZNF274Q96GC6 653 aaPredicted RBP15.21■□□□□ 0.03
RAB5C-206ENST00000550406 ISY1Q9ULR0 285 aaKnown RBP15.21■□□□□ 0.03
RAB5C-206ENST00000550406 CASP8AP2Q9UKL3 1982 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 PCNTO95613 3336 aa15.21■□□□□ 0.03
RAB5C-206ENST00000550406 ZNF536O15090 1300 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 GOLGA8AA7E2F4 631 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 GOLGA8BA8MQT2 603 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 FOXN1O15353 648 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
RAB5C-206ENST00000550406 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-206ENST00000550406 RCAN1P53805 252 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 FUT2Q10981 343 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 TMEM132BQ14DG7 1078 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 NOL8Q76FK4 1167 aaKnown RBP15.2■□□□□ 0.02
RAB5C-206ENST00000550406 ADGRF4Q8IZF3 695 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 SMCR8Q8TEV9 937 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-206ENST00000550406 MTMR8Q96EF0 704 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 JMJD4Q9H9V9 463 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 SLC38A10Q9HBR0 1119 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 MORF4L1Q9UBU8 362 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 RABGAP1Q9Y3P9 1069 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
RAB5C-206ENST00000550406 GPR25O00155 361 aa15.19■□□□□ 0.02
RAB5C-206ENST00000550406 HSPA1AP0DMV8 641 aaKnown RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 HSPA1BP0DMV9 641 aaKnown RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 CCT2P78371 535 aaKnown RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 IKQ13123 557 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 ME3Q16798 604 aa15.19■□□□□ 0.02
RAB5C-206ENST00000550406 RTN1Q16799 776 aa15.19■□□□□ 0.02
RAB5C-206ENST00000550406 TMTC3Q6ZXV5 915 aa15.19■□□□□ 0.02
RAB5C-206ENST00000550406 CTCFLQ8NI51 663 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
RAB5C-206ENST00000550406 BEGAINQ9BUH8 593 aa15.19■□□□□ 0.02
RAB5C-206ENST00000550406 RANBP17Q9H2T7 1088 aaKnown RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 NCOA5Q9HCD5 579 aaKnown RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 VAT1LQ9HCJ6 419 aa15.19■□□□□ 0.02
RAB5C-206ENST00000550406 ZNF214Q9UL59 606 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 NAP1L2Q9ULW6 460 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-206ENST00000550406 PFKFB2O60825 505 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 HSPA8P11142 646 aaKnown RBP15.18■□□□□ 0.02
RAB5C-206ENST00000550406 TAL1P17542 331 aaPredicted RBP15.18■□□□□ 0.02
RAB5C-206ENST00000550406 CTGFP29279 349 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 KIF5BP33176 963 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 METAP2P50579 478 aaKnown RBP eCLIP15.18■□□□□ 0.02
RAB5C-206ENST00000550406 ERVK-9P63128 1117 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 ERVK-24P63145 666 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 ST3GAL1Q11201 340 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 STK3Q13188 491 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 NTRK3Q16288 839 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 GTF3C2Q8WUA4 911 aaPredicted RBP15.18■□□□□ 0.02
RAB5C-206ENST00000550406 RAVER2Q9HCJ3 691 aaKnown RBP15.18■□□□□ 0.02
RAB5C-206ENST00000550406 RIPK3Q9Y572 518 aa15.18■□□□□ 0.02
RAB5C-206ENST00000550406 ATP2A1O14983 1001 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms