RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
RAB5C-204ENST00000547517 ZBED4O75132 1171 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 CDC45O75419 566 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 STAT3P40763 770 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 RGS19P49795 217 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 TRIM32Q13049 653 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 CCL14Q16627 93 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 SNRNP48Q6IEG0 339 aaKnown RBP13.91□□□□□ -0.18
RAB5C-204ENST00000547517 CASC1Q6TDU7 716 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 FAM160B2Q86V87 743 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 RIOX2Q8IUF8 465 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 CPXCR1Q8N123 301 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 RNF208Q9H0X6 261 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 MROH8Q9H579 483 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 ANO2Q9NQ90 1003 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 TAF6LQ9Y6J9 622 aa13.91□□□□□ -0.18
RAB5C-204ENST00000547517 TNKSO95271 1327 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 SLC25A27O95847 323 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 XRCC5P13010 732 aaKnown RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 EN2P19622 333 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 ADORA2AP29274 412 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 TRDNQ13061 729 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 ERICH6BQ5W0A0 696 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 RALYLQ86SE5 291 aaKnown RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 ENAHQ8N8S7 591 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 MAP4K1Q92918 833 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 TTC14Q96N46 770 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 ZSCAN10Q96SZ4 725 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 SLC38A10Q9HBR0 1119 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 RAVER2Q9HCJ3 691 aaKnown RBP13.9□□□□□ -0.18
RAB5C-204ENST00000547517 ZSWIM5Q9P217 1185 aa13.9□□□□□ -0.18
RAB5C-204ENST00000547517 PDHBP11177 359 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 FCER1AP12319 257 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
RAB5C-204ENST00000547517 COPB2P35606 906 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 SNAP25P60880 206 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 CYB5R4Q7L1T6 521 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 DGKHQ86XP1 1220 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 TRMT44Q8IYL2 757 aaKnown RBP13.89□□□□□ -0.19
RAB5C-204ENST00000547517 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 MMP19Q99542 508 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 KAT14Q9H8E8 782 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 GPCPD1Q9NPB8 672 aa13.89□□□□□ -0.19
RAB5C-204ENST00000547517 E7EWF7 191 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 STRNO43815 780 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 SLC16A2P36021 539 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 DPP9Q86TI2 863 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 PNMA1Q8ND90 353 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 NCOA7Q8NI08 942 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 SHISA4Q96DD7 197 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB5C-204ENST00000547517 HOMER2Q9NSB8 354 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 FLRT1Q9NZU1 646 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 PRR12Q9ULL5 1215 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 RIPK3Q9Y572 518 aa13.88□□□□□ -0.19
RAB5C-204ENST00000547517 KIAA0100Q14667 2235 aaKnown RBP13.87□□□□□ -0.19
RAB5C-204ENST00000547517 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 PLA2G6O60733 806 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 COBLO75128 1261 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 GJB1P08034 283 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 HOXC6P09630 235 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 OAZ1P54368 228 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 ZNF543Q08ER8 600 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 KCTD2Q14681 263 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 IFIT1BQ5T764 474 aaKnown RBP13.87□□□□□ -0.19
RAB5C-204ENST00000547517 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 ABRAQ8N0Z2 381 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 DEFB118Q96PH6 123 aa13.87□□□□□ -0.19
RAB5C-204ENST00000547517 MKI67P46013 3256 aaKnown RBP13.86□□□□□ -0.19
RAB5C-204ENST00000547517 SLC27A2O14975 620 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 PGK2P07205 417 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 FDX1P10109 184 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 TAL1P17542 331 aaPredicted RBP13.86□□□□□ -0.19
RAB5C-204ENST00000547517 GJA8P48165 433 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 CACNB2Q08289 660 aaPredicted RBP13.86□□□□□ -0.19
RAB5C-204ENST00000547517 MAP3K21Q5TCX8 1036 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 CREB3L3Q68CJ9 461 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 CHST3Q7LGC8 479 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 U2AF1L4Q8WU68 220 aaKnown RBP13.86□□□□□ -0.19
RAB5C-204ENST00000547517 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 AGBL1Q96MI9 1066 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 HMX1Q9NP08 348 aaPredicted RBP13.86□□□□□ -0.19
RAB5C-204ENST00000547517 PAK6Q9NQU5 681 aaPredicted RBP13.86□□□□□ -0.19
RAB5C-204ENST00000547517 SLC5A4Q9NY91 659 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 ZNF536O15090 1300 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
RAB5C-204ENST00000547517 ERICH2A1L162 156 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms