RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 TMEM240Q5SV17 173 aa13.87□□□□□ -0.19
TMEM258-208ENST00000545210 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
TMEM258-208ENST00000545210 CCSAPQ6IQ19 270 aaPredicted RBP13.87□□□□□ -0.19
TMEM258-208ENST00000545210 ERC1Q8IUD2 1116 aa13.87□□□□□ -0.19
TMEM258-208ENST00000545210 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
TMEM258-208ENST00000545210 KLHDC9Q8NEP7 349 aa13.87□□□□□ -0.19
TMEM258-208ENST00000545210 ATXN2LQ8WWM7 1075 aaKnown RBP13.87□□□□□ -0.19
TMEM258-208ENST00000545210 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
TMEM258-208ENST00000545210 FAM184BQ9ULE4 1060 aa13.87□□□□□ -0.19
TMEM258-208ENST00000545210 PPP1R9AQ9ULJ8 1098 aa13.87□□□□□ -0.19
TMEM258-208ENST00000545210 MBD4O95243 580 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 SNAI1O95863 264 aaPredicted RBP13.86□□□□□ -0.19
TMEM258-208ENST00000545210 ACRP10323 421 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 RLBP1P12271 317 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 CEP85Q6P2H3 762 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 REPS2Q8NFH8 660 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 ADAMTS19Q8TE59 1207 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 CCDC17Q96LX7 622 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 GLT1D1Q96MS3 346 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 ASB2Q96Q27 587 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 ATP8A2Q9NTI2 1148 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 THEGQ9P2T0 379 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 ZHX1Q9UKY1 873 aaPredicted RBP13.86□□□□□ -0.19
TMEM258-208ENST00000545210 MROH7Q68CQ1 1323 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
TMEM258-208ENST00000545210 USP17L12C9JPN9 530 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 USP17L21D6R901 530 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 ADCY6O43306 1168 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 DUSP11O75319 330 aaKnown RBP13.85□□□□□ -0.19
TMEM258-208ENST00000545210 ASGR1P07306 291 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 C6orf222P0C671 652 aaPredicted RBP13.85□□□□□ -0.19
TMEM258-208ENST00000545210 COPB2P35606 906 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 CDK7P50613 346 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 C12orf60Q5U649 245 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 RASIP1Q5U651 963 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 CCDC174Q6PII3 467 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 TMEM199Q8N511 208 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 MSL3Q8N5Y2 521 aaKnown RBP13.85□□□□□ -0.19
TMEM258-208ENST00000545210 VTI1AQ96AJ9 217 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 BCL11AQ9H165 835 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 KANSL2Q9H9L4 492 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 ELP1O95163 1332 aa13.85□□□□□ -0.19
TMEM258-208ENST00000545210 APBB1O00213 710 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 IGFBP4P22692 258 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
TMEM258-208ENST00000545210 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 MRPS5P82675 430 aaKnown RBP13.84□□□□□ -0.19
TMEM258-208ENST00000545210 ADGRE1Q14246 886 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
TMEM258-208ENST00000545210 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 PCSK9Q8NBP7 692 aaKnown RBP13.84□□□□□ -0.19
TMEM258-208ENST00000545210 RHPN1Q8TCX5 695 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 NUP88Q99567 741 aaPredicted RBP13.84□□□□□ -0.19
TMEM258-208ENST00000545210 TEX13BQ9BXU2 312 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 RIPK3Q9Y572 518 aa13.84□□□□□ -0.19
TMEM258-208ENST00000545210 NCOR1O75376 2440 aa13.83□□□□□ -0.19
TMEM258-208ENST00000545210 DNAJC25-GNG10A0A024R161 153 aa13.83□□□□□ -0.2
TMEM258-208ENST00000545210 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.2
TMEM258-208ENST00000545210 ARVCFO00192 962 aa13.83□□□□□ -0.2
TMEM258-208ENST00000545210 ACVR2BQ13705 512 aa13.83□□□□□ -0.2
TMEM258-208ENST00000545210 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
TMEM258-208ENST00000545210 GNASQ5JWF2 1037 aa13.83□□□□□ -0.2
TMEM258-208ENST00000545210 PSRC1Q6PGN9 363 aaPredicted RBP13.83□□□□□ -0.2
TMEM258-208ENST00000545210 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.83□□□□□ -0.2
TMEM258-208ENST00000545210 SLF1Q9BQI6 1058 aa13.83□□□□□ -0.2
TMEM258-208ENST00000545210 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
TMEM258-208ENST00000545210 CHGBP05060 677 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
TMEM258-208ENST00000545210 CYP2C18P33260 490 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 ADD2P35612 726 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 HSP90AB4PQ58FF6 505 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 FAM126BQ8IXS8 530 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 CLASRPQ8N2M8 674 aaKnown RBP13.82□□□□□ -0.2
TMEM258-208ENST00000545210 UHRF1Q96T88 793 aaPredicted RBP13.82□□□□□ -0.2
TMEM258-208ENST00000545210 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.82□□□□□ -0.2
TMEM258-208ENST00000545210 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
TMEM258-208ENST00000545210 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 SPC25Q9HBM1 224 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 PAG1Q9NWQ8 432 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
TMEM258-208ENST00000545210 CXXC1Q9P0U4 656 aaPredicted RBP13.82□□□□□ -0.2
TMEM258-208ENST00000545210 MSRAQ9UJ68 235 aa13.82□□□□□ -0.2
TMEM258-208ENST00000545210 TLR3O15455 904 aaKnown RBP13.81□□□□□ -0.2
TMEM258-208ENST00000545210 GJA9P57773 515 aa13.81□□□□□ -0.2
TMEM258-208ENST00000545210 RAB30Q15771 203 aa13.81□□□□□ -0.2
TMEM258-208ENST00000545210 CTR9Q6PD62 1173 aa13.81□□□□□ -0.2
TMEM258-208ENST00000545210 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
TMEM258-208ENST00000545210 IL27Q8NEV9 243 aa13.81□□□□□ -0.2
TMEM258-208ENST00000545210 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
TMEM258-208ENST00000545210 ABHD16BQ9H3Z7 469 aa13.81□□□□□ -0.2
TMEM258-208ENST00000545210 SLC28A3Q9HAS3 691 aa13.81□□□□□ -0.2
TMEM258-208ENST00000545210 IL23AQ9NPF7 189 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms