RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ABRAQ8N0Z2 381 aa17.75■□□□□ 0.43
RAB40B-202ENST00000538809 GMCL1P1Q8NEA9 526 aa17.75■□□□□ 0.43
RAB40B-202ENST00000538809 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
RAB40B-202ENST00000538809 DDX20Q9UHI6 824 aaKnown RBP17.75■□□□□ 0.43
RAB40B-202ENST00000538809 NR2E3Q9Y5X4 410 aa17.75■□□□□ 0.43
RAB40B-202ENST00000538809 RANBP6O60518 1105 aaKnown RBP17.74■□□□□ 0.43
RAB40B-202ENST00000538809 IGHA2P01877 340 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 HSPD1P10809 573 aaKnown RBP17.74■□□□□ 0.43
RAB40B-202ENST00000538809 SDSP20132 328 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 HAND2P61296 217 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 RRP12Q5JTH9 1297 aaKnown RBP17.74■□□□□ 0.43
RAB40B-202ENST00000538809 SNRNP48Q6IEG0 339 aaKnown RBP17.74■□□□□ 0.43
RAB40B-202ENST00000538809 CPXCR1Q8N123 301 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 PRPF38AQ8NAV1 312 aaKnown RBP17.74■□□□□ 0.43
RAB40B-202ENST00000538809 MAML3Q96JK9 1138 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 TOMM22Q9NS69 142 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 SLC5A4Q9NY91 659 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 ANAPC4Q9UJX5 808 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 STX8Q9UNK0 236 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 LRRC37A2A6NM11 1700 aa17.74■□□□□ 0.43
RAB40B-202ENST00000538809 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 FGAP02671 866 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 BMP3P12645 472 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 KCTD2Q14681 263 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 PRAMEF19Q5SWL8 479 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 ANO1Q5XXA6 986 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 TEX13BQ9BXU2 312 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 RAVER2Q9HCJ3 691 aaKnown RBP17.73■□□□□ 0.43
RAB40B-202ENST00000538809 IL17RBQ9NRM6 502 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 FEM1BQ9UK73 627 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 SYNPO2Q9UMS6 1093 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 MTMR7Q9Y216 660 aa17.73■□□□□ 0.43
RAB40B-202ENST00000538809 CTDP1Q9Y5B0 961 aaPredicted RBP17.73■□□□□ 0.43
RAB40B-202ENST00000538809 ORC4O43929 436 aa17.72■□□□□ 0.43
RAB40B-202ENST00000538809 FGRP09769 529 aa17.72■□□□□ 0.43
RAB40B-202ENST00000538809 COPB2P35606 906 aa17.72■□□□□ 0.43
RAB40B-202ENST00000538809 RIPK3Q9Y572 518 aa17.72■□□□□ 0.43
RAB40B-202ENST00000538809 TMEM232C9JQI7 657 aa17.71■□□□□ 0.43
RAB40B-202ENST00000538809 ZBED4O75132 1171 aa17.71■□□□□ 0.43
RAB40B-202ENST00000538809 MCCP23508 829 aa17.71■□□□□ 0.43
RAB40B-202ENST00000538809 IKQ13123 557 aaPredicted RBP17.71■□□□□ 0.43
RAB40B-202ENST00000538809 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
RAB40B-202ENST00000538809 SLC38A10Q9HBR0 1119 aa17.71■□□□□ 0.43
RAB40B-202ENST00000538809 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
RAB40B-202ENST00000538809 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
RAB40B-202ENST00000538809 ZMYND8Q9ULU4 1186 aaPredicted RBP17.71■□□□□ 0.43
RAB40B-202ENST00000538809 DNAH12Q6ZR08 3092 aa17.71■□□□□ 0.43
RAB40B-202ENST00000538809 LTBP2Q14767 1821 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 MSCO60682 206 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 COL6A1P12109 1028 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 GSPT1P15170 499 aaKnown RBP17.7■□□□□ 0.42
RAB40B-202ENST00000538809 SLC1A4P43007 532 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 STAT2P52630 851 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 ZNF792Q3KQV3 632 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 KCTD1Q719H9 257 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 TBC1D10CQ8IV04 446 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 GMCL1Q96IK5 515 aa17.7■□□□□ 0.42
RAB40B-202ENST00000538809 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
RAB40B-202ENST00000538809 NOVP48745 357 aa17.69■□□□□ 0.42
RAB40B-202ENST00000538809 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
RAB40B-202ENST00000538809 PPP4R3BQ5MIZ7 849 aa17.69■□□□□ 0.42
RAB40B-202ENST00000538809 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
RAB40B-202ENST00000538809 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
RAB40B-202ENST00000538809 ATP2A1O14983 1001 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 SEPT4O43236 478 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
RAB40B-202ENST00000538809 SYN1P17600 705 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 FXR1P51114 621 aaKnown RBP eCLIP17.68■□□□□ 0.42
RAB40B-202ENST00000538809 SNAP25P60880 206 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 LRRC26Q2I0M4 334 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 GJC2Q5T442 439 aaPredicted RBP17.68■□□□□ 0.42
RAB40B-202ENST00000538809 TTC22Q5TAA0 569 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 TINF2Q9BSI4 451 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 SENP6Q9GZR1 1112 aaPredicted RBP17.68■□□□□ 0.42
RAB40B-202ENST00000538809 NEDD4P46934 1319 aa17.68■□□□□ 0.42
RAB40B-202ENST00000538809 TAL1P17542 331 aaPredicted RBP17.67■□□□□ 0.42
RAB40B-202ENST00000538809 AKNAD1Q5T1N1 836 aa17.67■□□□□ 0.42
RAB40B-202ENST00000538809 FAM160B2Q86V87 743 aa17.67■□□□□ 0.42
RAB40B-202ENST00000538809 CHURC1Q8WUH1 139 aa17.67■□□□□ 0.42
RAB40B-202ENST00000538809 STAG1Q8WVM7 1258 aa17.67■□□□□ 0.42
RAB40B-202ENST00000538809 DIS3Q9Y2L1 958 aaKnown RBP17.67■□□□□ 0.42
RAB40B-202ENST00000538809 HIP1O00291 1037 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 DNM1LO00429 736 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 ATN1P54259 1190 aaPredicted RBP17.66■□□□□ 0.42
RAB40B-202ENST00000538809 OAZ1P54368 228 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 RCSD1Q6JBY9 416 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 CCDC174Q6PII3 467 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 LENG1Q96BZ8 264 aaPredicted RBP17.66■□□□□ 0.42
RAB40B-202ENST00000538809 AGBL1Q96MI9 1066 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 TMEM47Q9BQJ4 181 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 IL25Q9H293 177 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 PRO3102Q9H379 93 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 ZNF536O15090 1300 aa17.66■□□□□ 0.42
RAB40B-202ENST00000538809 FRMPD2Q68DX3 1309 aaPredicted RBP17.66■□□□□ 0.42
RAB40B-202ENST00000538809 DNAJC25-GNG10A0A024R161 153 aa17.65■□□□□ 0.42
RAB40B-202ENST00000538809 ANKRD35Q8N283 1001 aa17.65■□□□□ 0.42
RAB40B-202ENST00000538809 CHST13Q8NET6 341 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms