RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 ERC1Q8IUD2 1116 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 FAM9BQ8IZU0 186 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 MIGA1Q8NAN2 632 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 DDRGK1Q96HY6 314 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 DBNDD2Q9BQY9 259 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 KCNH6Q9H252 994 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 FBXO40Q9UH90 709 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 ZNF214Q9UL59 606 aaPredicted RBP6.78□□□□□ -1.32
CTSB-216ENST00000530290 PPP1R9AQ9ULJ8 1098 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 SYNPO2Q9UMS6 1093 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 TRANK1O15050 2925 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 TANC1Q9C0D5 1861 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 CACNA1AO00555 2505 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 ZNF318Q5VUA4 2279 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 MAGEB6P1A0A0J9YX57 407 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 PNMA6EA0A0J9YXQ4 647 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 A0A1W2PRG0 241 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 VWA5AO00534 786 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 ATP2A1O14983 1001 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 GPR37L1O60883 481 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 CD4P01730 458 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 FGBP02675 491 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 ASGR1P07306 291 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 C6orf222P0C671 652 aaPredicted RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 FDX1P10109 184 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 BMP1P13497 986 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 CSF2RAP15509 400 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 PLCD1P51178 756 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 OAZ1P54368 228 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 DYNLL1P63167 89 aaKnown RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 POLA2Q14181 598 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 ADGRE1Q14246 886 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 PRAMEF19Q5SWL8 479 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 ZNF365Q70YC5 407 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 TRMT2AQ8IZ69 625 aaKnown RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 SSH3Q8TE77 659 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 SLC9A7Q96T83 725 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 RIOK1Q9BRS2 568 aaKnown RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 HIPK3Q9H422 1215 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 EPHX3Q9H6B9 360 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 KANSL2Q9H9L4 492 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 PIH1D3Q9NQM4 214 aaKnown RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 SNRKQ9NRH2 765 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 MCM9Q9NXL9 1143 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 DBNLQ9UJU6 430 aaKnown RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 ZHX1Q9UKY1 873 aaPredicted RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 NOP58Q9Y2X3 529 aaKnown RBP6.77□□□□□ -1.33
CTSB-216ENST00000530290 SLC4A7Q9Y6M7 1214 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 ZDBF2Q9HCK1 2354 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 MYH4Q9Y623 1939 aa6.77□□□□□ -1.33
CTSB-216ENST00000530290 CACNA1HO95180 2353 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 DNAJC25-GNG10A0A024R161 153 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 ACTN1P12814 892 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 RFC2P35250 354 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 PBX2P40425 430 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 ACVR2BQ13705 512 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 HSP90AB4PQ58FF6 505 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 GNASQ5JWF2 1037 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 SLC43A3Q8NBI5 491 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 CHST13Q8NET6 341 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 REPS2Q8NFH8 660 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 PHOSPHO2Q8TCD6 241 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.76□□□□□ -1.33
CTSB-216ENST00000530290 VTI1AQ96AJ9 217 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 DDX11Q96FC9 970 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 NECAB3Q96P71 396 aaPredicted RBP6.76□□□□□ -1.33
CTSB-216ENST00000530290 SLF1Q9BQI6 1058 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 NKX2-4Q9H2Z4 354 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 DCP1AQ9NPI6 582 aaPredicted RBP6.76□□□□□ -1.33
CTSB-216ENST00000530290 C11orf16Q9NQ32 467 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 ATP8A2Q9NTI2 1148 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.76□□□□□ -1.33
CTSB-216ENST00000530290 LMCD1Q9NZU5 365 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.76□□□□□ -1.33
CTSB-216ENST00000530290 SCN10AQ9Y5Y9 1956 aa6.76□□□□□ -1.33
CTSB-216ENST00000530290 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 GRXCR1A8MXD5 290 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 KIF28PB7ZC32 967 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 SURF6O75683 361 aaKnown RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 SNAI1O95863 264 aaPredicted RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 PGK2P07205 417 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 SUPT20HL2P0C7V6 817 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 ATP2A2P16615 1042 aaKnown RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 RARSP54136 660 aaKnown RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 SKIV2LQ15477 1246 aaKnown RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 TMEM67Q5HYA8 995 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 SNRNP48Q6IEG0 339 aaKnown RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 SPICE1Q8N0Z3 855 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 NOC4LQ9BVI4 516 aaKnown RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 PPP1R12CQ9BZL4 782 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 Q9Y3F1 56 aa6.75□□□□□ -1.33
CTSB-216ENST00000530290 CTDP1Q9Y5B0 961 aaPredicted RBP6.75□□□□□ -1.33
CTSB-216ENST00000530290 REV3LO60673 3130 aa6.74□□□□□ -1.33
CTSB-216ENST00000530290 ASB14A6NK59 587 aa6.74□□□□□ -1.33
CTSB-216ENST00000530290 PRR33A8MZF0 331 aa6.74□□□□□ -1.33
CTSB-216ENST00000530290 BAIAP3O94812 1187 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms