RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CREB3L3Q68CJ9 461 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 KCTD1Q719H9 257 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 RASGRP2Q7LDG7 609 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 RIOX2Q8IUF8 465 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 SLAIN1Q8ND83 568 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 SOCS4Q8WXH5 440 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 UBAC1Q9BSL1 405 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 MROH8Q9H579 483 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 SLC38A10Q9HBR0 1119 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 CWC22Q9HCG8 908 aaKnown RBP14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 ZNF214Q9UL59 606 aaPredicted RBP14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 ISY1Q9ULR0 285 aaKnown RBP14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 TNKSO95271 1327 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 ATP2A1O14983 1001 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 STRNO43815 780 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 SNHG28P0DPA3 235 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 FDX1P10109 184 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 PDHBP11177 359 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 CYP2B6P20813 491 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 SEC23AQ15436 765 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 BTNL9Q6UXG8 535 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 RALYLQ86SE5 291 aaKnown RBP14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 KAT14Q9H8E8 782 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 IVNS1ABPQ9Y6Y0 642 aa14.88□□□□□ -0.03
CCDC90B-216ENST00000529856 ELNP15502 786 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 RGS2P41220 211 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 IKQ13123 557 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 MAP2K5Q13163 448 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 GRB14Q14449 540 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 CCDC96Q2M329 555 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 TTBK2Q6IQ55 1244 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 NCAPG2Q86XI2 1143 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 MB21D2Q8IYB1 491 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 PNMA1Q8ND90 353 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 TEX13BQ9BXU2 312 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 CTDP1Q9Y5B0 961 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 CENPFP49454 3210 aa14.87□□□□□ -0.03
CCDC90B-216ENST00000529856 IFIT3O14879 490 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 COPB2P35606 906 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 OAZ1P54368 228 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 ZNF543Q08ER8 600 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 IFIT1BQ5T764 474 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 RNF20Q5VTR2 975 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 ABRAQ8N0Z2 381 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 CPXCR1Q8N123 301 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 RAVER2Q9HCJ3 691 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 GPCPD1Q9NPB8 672 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 BIN2Q9UBW5 565 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 PRR12Q9ULL5 1215 aa14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 FRMPD2Q68DX3 1309 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-216ENST00000529856 HOXC6P09630 235 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 SLC16A2P36021 539 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 SOX10P56693 466 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 ANTXR2P58335 489 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 UBXN2AP68543 259 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 TSGA10IPQ3SY00 556 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 GPATCH4Q5T3I0 446 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 SNRNP48Q6IEG0 339 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 CHST3Q7LGC8 479 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 TRMT44Q8IYL2 757 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 MTA3Q9BTC8 594 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 RIPK3Q9Y572 518 aa14.85□□□□□ -0.03
CCDC90B-216ENST00000529856 ZNFX1Q9P2E3 1918 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 ERICH2A1L162 156 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 REC8O95072 547 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 MYCP01106 439 aaPredicted RBP14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 HMGCRP04035 888 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 INHAP05111 366 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 FCER1AP12319 257 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 ADORA2AP29274 412 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 MCM5P33992 734 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 WTAPQ15007 396 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 SART3Q15020 963 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 MTFR1Q15390 333 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 SYDE2Q5VT97 1194 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 DPP9Q86TI2 863 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 IGDCC4Q8TDY8 1250 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 TRIB2Q92519 343 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 APBA2Q99767 749 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 ZNF536O15090 1300 aa14.84□□□□□ -0.03
CCDC90B-216ENST00000529856 COBLO75128 1261 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 GOLGA8HP0CJ92 632 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 ZKSCAN1P17029 563 aaPredicted RBP14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 SLC4A3P48751 1232 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 RGS19P49795 217 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 SNAP25P60880 206 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 CCL14Q16627 93 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 ASPRV1Q53RT3 343 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 TMEM67Q5HYA8 995 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 NPLOC4Q8TAT6 608 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 KCNB2Q92953 911 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 AGBL1Q96MI9 1066 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 MMP19Q99542 508 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 RANBP17Q9H2T7 1088 aaKnown RBP14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 SENP2Q9HC62 589 aa14.83□□□□□ -0.04
CCDC90B-216ENST00000529856 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 POTEFA5A3E0 1075 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms