RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 SLC4A10Q6U841 1118 aa10.09□□□□□ -0.79
USP48-212ENST00000527823 IDI2Q9BXS1 227 aa10.09□□□□□ -0.79
USP48-212ENST00000527823 SRCIN1Q9C0H9 1055 aa10.09□□□□□ -0.79
USP48-212ENST00000527823 CYLDQ9NQC7 956 aa10.09□□□□□ -0.79
USP48-212ENST00000527823 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
USP48-212ENST00000527823 ZNF236Q9UL36 1845 aa10.09□□□□□ -0.79
USP48-212ENST00000527823 SALL1Q9NSC2 1324 aa10.08□□□□□ -0.8
USP48-212ENST00000527823 PEX10O60683 326 aa10.08□□□□□ -0.8
USP48-212ENST00000527823 ENTPD3O75355 529 aa10.08□□□□□ -0.8
USP48-212ENST00000527823 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
USP48-212ENST00000527823 MAFAQ8NHW3 353 aaPredicted RBP10.08□□□□□ -0.8
USP48-212ENST00000527823 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
USP48-212ENST00000527823 IRX2Q9BZI1 471 aaPredicted RBP10.08□□□□□ -0.8
USP48-212ENST00000527823 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
USP48-212ENST00000527823 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
USP48-212ENST00000527823 NCOR1O75376 2440 aa10.08□□□□□ -0.8
USP48-212ENST00000527823 A0A0G2JMZ2 1700 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 ZIC2O95409 532 aaPredicted RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 SLC5A1P13866 664 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 CYP2B6P20813 491 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 ZEB1P37275 1124 aaPredicted RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 SCTRP47872 440 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 RFX5P48382 616 aaPredicted RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 GCLCP48506 637 aaPredicted RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 HMGCS2P54868 508 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 NCOA4Q13772 614 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 CCDC184Q52MB2 194 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 CDX2Q99626 313 aaPredicted RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 KLF16Q9BXK1 252 aaPredicted RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 ASCC2Q9H1I8 757 aaPredicted RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
USP48-212ENST00000527823 LRRFIP2Q9Y608 721 aaKnown RBP10.07□□□□□ -0.8
USP48-212ENST00000527823 ZKSCAN1P17029 563 aaPredicted RBP10.06□□□□□ -0.8
USP48-212ENST00000527823 CCND3P30281 292 aaPredicted RBP10.06□□□□□ -0.8
USP48-212ENST00000527823 PICALMQ13492 652 aa10.06□□□□□ -0.8
USP48-212ENST00000527823 PKDCCQ504Y2 493 aa10.06□□□□□ -0.8
USP48-212ENST00000527823 ZSCAN29Q8IWY8 852 aaPredicted RBP10.06□□□□□ -0.8
USP48-212ENST00000527823 SOCS4Q8WXH5 440 aa10.06□□□□□ -0.8
USP48-212ENST00000527823 LPIN2Q92539 896 aa10.06□□□□□ -0.8
USP48-212ENST00000527823 TXNRD2Q9NNW7 524 aa10.06□□□□□ -0.8
USP48-212ENST00000527823 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
USP48-212ENST00000527823 BDP1A6H8Y1 2624 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 EYA2O00167 538 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 LILRA1O75019 489 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 TIMP2P16035 220 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 PHKA1P46020 1223 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 CACNB2Q08289 660 aaPredicted RBP10.05□□□□□ -0.8
USP48-212ENST00000527823 SPP2Q13103 211 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 RRP1BQ14684 758 aaKnown RBP10.05□□□□□ -0.8
USP48-212ENST00000527823 CCL14Q16627 93 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 ATG9AQ7Z3C6 839 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 ZNF280CQ8ND82 737 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 MYLIPQ8WY64 445 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 TTYH1Q9H313 450 aaPredicted RBP10.05□□□□□ -0.8
USP48-212ENST00000527823 MROH7-TTC4A0A0A0MT08 1334 aa10.05□□□□□ -0.8
USP48-212ENST00000527823 CHD9Q3L8U1 2897 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 REV3LO60673 3130 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 XRCC5P13010 732 aaKnown RBP10.04□□□□□ -0.8
USP48-212ENST00000527823 ADD1P35611 737 aaKnown RBP10.04□□□□□ -0.8
USP48-212ENST00000527823 BTDP43251 543 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 RHBDL3P58872 404 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 CBLBQ13191 982 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 ATP2B3Q16720 1220 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 EML3Q32P44 896 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 C9orf50Q5SZB4 431 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 ZNF384Q8TF68 577 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 USP6NLQ92738 828 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 APBA2Q99767 749 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
USP48-212ENST00000527823 PORCNQ9H237 461 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 RAPGEFL1Q9UHV5 662 aa10.04□□□□□ -0.8
USP48-212ENST00000527823 DGAT1O75907 488 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 ADORA1P30542 326 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 ERVK-9P63128 1117 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 USP4Q13107 963 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP48-212ENST00000527823 RASGRF1Q13972 1273 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
USP48-212ENST00000527823 PLEKHM2Q8IWE5 1019 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 USP38Q8NB14 1042 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 PARP14Q460N5 1801 aa10.03□□□□□ -0.8
USP48-212ENST00000527823 CHD7Q9P2D1 2997 aa10.02□□□□□ -0.8
USP48-212ENST00000527823 CAPN5O15484 640 aaPredicted RBP10.02□□□□□ -0.81
USP48-212ENST00000527823 HERVK_113P62684 666 aa10.02□□□□□ -0.81
USP48-212ENST00000527823 IRX3P78415 501 aaPredicted RBP10.02□□□□□ -0.81
USP48-212ENST00000527823 SHHQ15465 462 aa10.02□□□□□ -0.81
USP48-212ENST00000527823 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.81
USP48-212ENST00000527823 GPR142Q7Z601 462 aa10.02□□□□□ -0.81
USP48-212ENST00000527823 WDR63Q8IWG1 891 aa10.02□□□□□ -0.81
USP48-212ENST00000527823 LBHD1Q9BQE6 289 aaPredicted RBP10.02□□□□□ -0.81
USP48-212ENST00000527823 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.81
USP48-212ENST00000527823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP48-212ENST00000527823 FLRT1Q9NZU1 646 aa10.02□□□□□ -0.81
USP48-212ENST00000527823 DENND2AQ9ULE3 1009 aa10.02□□□□□ -0.81
USP48-212ENST00000527823 XIRP2A4UGR9 3374 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 1417.5 ms