RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 ALS2CLQ60I27 953 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 MSL1Q68DK7 614 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 VPS37DQ86XT2 251 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 CERKQ8TCT0 537 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 PSMB7Q99436 277 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 EBF2Q9HAK2 575 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 BATF3Q9NR55 127 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 FAM153AQ9UHL3 310 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 LEMD3Q9Y2U8 911 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 DUSP10Q9Y6W6 482 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 FAM237AA0A1B0GTK4 181 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 RCCD1A6NED2 376 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 PPP6R2O75170 966 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 EPHB4P54760 987 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 XRCC4Q13426 336 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 VPS16Q9H269 839 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 NCAPD2Q15021 1401 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 ABCA3Q99758 1704 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 SYNRGQ9UMZ2 1314 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 KLF18A0A0U1RQI7 1052 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 GOLGA8BA8MQT2 603 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 IDEP14735 1019 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 SARSP49591 514 aaKnown RBP11.36□□□□□ -0.59
SPIDR-224ENST00000524126 PPP1R7Q15435 360 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 TCP11Q8WWU5 503 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 CCDC51Q96ER9 411 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 FAM167BQ9BTA0 163 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 LACRTQ9GZZ8 138 aa11.36□□□□□ -0.59
SPIDR-224ENST00000524126 LTBP4Q8N2S1 1624 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 CFAP58Q5T655 872 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 SMCR8Q8TEV9 937 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-224ENST00000524126 ACSBG1Q96GR2 724 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 SUCLG2Q96I99 432 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 GGA2Q9UJY4 613 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 LMO7Q8WWI1 1683 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 ESYT3A0FGR9 886 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 ZSCAN5CA6NGD5 496 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-224ENST00000524126 ADAMTS2O95450 1211 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 TMOD1P28289 359 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 GUCY2FP51841 1108 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 EIF4A1P60842 406 aaKnown RBP11.35□□□□□ -0.59
SPIDR-224ENST00000524126 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 SPATA1Q5VX52 437 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 NFXL1Q6ZNB6 911 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 TRIM74Q86UV6 250 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 TRIM73Q86UV7 250 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 SEC16BQ96JE7 1060 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 HAUS4Q9H6D7 363 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 HOMER3Q9NSC5 361 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 TAB2Q9NYJ8 693 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
SPIDR-224ENST00000524126 CPLX1O14810 134 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 DIAPH2O60879 1101 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 CLTAP09496 248 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 ITGB3BPQ13352 177 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-224ENST00000524126 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 HAUS3Q68CZ6 603 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 MMGT1Q8N4V1 131 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 DRAXINQ8NBI3 349 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-224ENST00000524126 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 CCDC47Q96A33 483 aaKnown RBP11.34□□□□□ -0.59
SPIDR-224ENST00000524126 BTG4Q9NY30 223 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 N4BP3O15049 544 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 MAP3K13O43283 966 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 PHKG2P15735 406 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 TATP17735 454 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-224ENST00000524126 CXCR5P32302 372 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 PRPHP41219 470 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 HAND2P61296 217 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 DPYDQ12882 1025 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 USP4Q13107 963 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 KRT31Q15323 416 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 GNPTABQ3T906 1256 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 CDKAL1Q5VV42 579 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 EMBQ6PCB8 327 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-224ENST00000524126 CREG2Q8IUH2 290 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 KAZALD1Q96I82 304 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 LMCD1Q9NZU5 365 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 NFU1Q9UMS0 254 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 PCDHGC5Q9Y5F6 944 aa11.34□□□□□ -0.59
SPIDR-224ENST00000524126 OVOS2A0A0G2JMS6 1433 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 COL5A2P05997 1499 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 A0A1B0GVG6 124 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 GMNCA6NCL1 334 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 NUTM2BA6NNL0 878 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 NUTM2EB1AL46 878 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms