RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 USP17L15C9J2P7 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 BTBD19C9JJ37 291 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L13C9JLJ4 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L11C9JVI0 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L18D6R9N7 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L22D6RA61 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L17D6RBQ6 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 DDAH1O94760 285 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 CALM1P0DP23 149 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 CALM2P0DP24 149 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 CALM3P0DP25 149 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 BMP3P12645 472 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 VCAM1P19320 739 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 OSBPP22059 807 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 DGKZQ13574 1117 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 MOGSQ13724 837 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 CCDC96Q2M329 555 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 KIAA1755Q5JYT7 1200 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 ZIC5Q96T25 663 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-205ENST00000518196 NAP1L2Q9ULW6 460 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-205ENST00000518196 SLC45A1Q9Y2W3 748 aa15.16■□□□□ 0.02
PABPC1-205ENST00000518196 KLF18A0A0U1RQI7 1052 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 POTEB2H3BUK9 544 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 ST18O60284 1047 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 PDHBP11177 359 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
PABPC1-205ENST00000518196 APOBRQ0VD83 1088 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 TOB2Q14106 344 aaPredicted RBP15.15■□□□□ 0.02
PABPC1-205ENST00000518196 FAM83BQ5T0W9 1011 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 GPAT2Q6NUI2 795 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 NUP133Q8WUM0 1156 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 MAP3K14Q99558 947 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 TANGO6Q9C0B7 1094 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 ZCCHC17Q9NP64 241 aaKnown RBP15.15■□□□□ 0.02
PABPC1-205ENST00000518196 PNMA3Q9UL41 463 aa15.15■□□□□ 0.02
PABPC1-205ENST00000518196 PDHXO00330 501 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 ZBTB43O43298 467 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 ALDH1A1P00352 501 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 PARP1P09874 1014 aaKnown RBP15.14■□□□□ 0.01
PABPC1-205ENST00000518196 SNHG28P0DPA3 235 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 KIF5BP33176 963 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 AK2P54819 239 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-205ENST00000518196 IKQ13123 557 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-205ENST00000518196 ASPRV1Q53RT3 343 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 GPATCH4Q5T3I0 446 aaKnown RBP15.14■□□□□ 0.01
PABPC1-205ENST00000518196 APOA5Q6Q788 366 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 CATSPERGQ6ZRH7 1159 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 CTCFLQ8NI51 663 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-205ENST00000518196 CHURC1Q8WUH1 139 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 NUP88Q99567 741 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-205ENST00000518196 PTPN18Q99952 460 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 FEM1BQ9UK73 627 aa15.14■□□□□ 0.01
PABPC1-205ENST00000518196 TMEM232C9JQI7 657 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.016e-8■■□□□ 13.7
PABPC1-205ENST00000518196 MLLT3P42568 568 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-205ENST00000518196 RCAN1P53805 252 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 EVCP57679 992 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 ZNF543Q08ER8 600 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 TROAPQ12815 778 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 GRM4Q14833 912 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 FAM160B2Q86V87 743 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 FAM43AQ8N2R8 423 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 ZNF274Q96GC6 653 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-205ENST00000518196 MYL10Q9BUA6 226 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 GPCPD1Q9NPB8 672 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 HOXC10Q9NYD6 342 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 BRPF3Q9ULD4 1205 aa15.13■□□□□ 0.01
PABPC1-205ENST00000518196 FRMPD2Q68DX3 1309 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-205ENST00000518196 GOLGA8AA7E2F4 631 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 GOLGA8BA8MQT2 603 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 PLA2G6O60733 806 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 FLOT1O75955 427 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 GNAQP50148 359 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 STAT2P52630 851 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 COG2Q14746 738 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 TAF1CQ15572 869 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-205ENST00000518196 MICU3Q86XE3 530 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 DNAJC5GQ8N7S2 189 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 FANCBQ8NB91 859 aa15.12■□□□□ 0.01
PABPC1-205ENST00000518196 PARK7Q99497 189 aaKnown RBP15.12■□□□□ 0.01
PABPC1-205ENST00000518196 ASCC2Q9H1I8 757 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-205ENST00000518196 CCDC196A0A1B0GTZ2 297 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 MCM2P49736 904 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 METAP2P50579 478 aaKnown RBP eCLIP15.11■□□□□ 0.016e-37■■■□□ 16.7
PABPC1-205ENST00000518196 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-205ENST00000518196 RTN1Q16799 776 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 NOL8Q76FK4 1167 aaKnown RBP15.11■□□□□ 0.01
PABPC1-205ENST00000518196 RAB11FIP4Q86YS3 637 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 PRPF38AQ8NAV1 312 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms