RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 STAG2Q8N3U4 1231 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 PHKBQ93100 1093 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 C12orf42Q96LP6 360 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
PFDN1-204ENST00000512707 CTDP1Q9Y5B0 961 aaPredicted RBP12.57□□□□□ -0.4
PFDN1-204ENST00000512707 TRPM7Q96QT4 1865 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 THSD7BQ9C0I4 1608 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 H3BQV1 296 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 PRPF3O43395 683 aaKnown RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 JAK2O60674 1132 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 PLA2G6O60733 806 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 CTDNEP1O95476 244 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 ZBTB48P10074 688 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 VCAM1P19320 739 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 CTCFP49711 727 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 VEGFBP49765 207 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 GTF2A2P52657 109 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 NTRK3Q16288 839 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 SH3D19Q5HYK7 790 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 CMTR1Q8N1G2 835 aaKnown RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 NUP88Q99567 741 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 ABT1Q9ULW3 272 aaKnown RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 KCNH4Q9UQ05 1017 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-204ENST00000512707 CNTNAP5Q8WYK1 1306 aa12.56□□□□□ -0.4
PFDN1-204ENST00000512707 A0A0G2JLL6 359 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 IRF6O14896 467 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 FDX1P10109 184 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 CETPP11597 493 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 ZNF157P51786 506 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 SYDE2Q5VT97 1194 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 LARP1BQ659C4 914 aaKnown RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 GADL1Q6ZQY3 521 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 PRRT2Q7Z6L0 340 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 ADGRF4Q8IZF3 695 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 PRPF38AQ8NAV1 312 aaKnown RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 WNK4Q96J92 1243 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 ALG1Q9BT22 464 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 UBA5Q9GZZ9 404 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 RPAP3Q9H6T3 665 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-204ENST00000512707 RIOX1Q9H6W3 641 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 VAT1LQ9HCJ6 419 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 WBP1LQ9NX94 342 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 PNMA2Q9UL42 364 aa12.55□□□□□ -0.4
PFDN1-204ENST00000512707 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 FLOT1O75955 427 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 SCG2P13521 617 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 SLC16A2P36021 539 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 NUCB2P80303 420 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 FUT2Q10981 343 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 RGMBQ6NW40 437 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 BTNL9Q6UXG8 535 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 RASGRP2Q7LDG7 609 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 SAPCD2Q86UD0 394 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-204ENST00000512707 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 KIFC2Q96AC6 838 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 SLF1Q9BQI6 1058 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 CHMP5Q9NZZ3 219 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
PFDN1-204ENST00000512707 PNMA6FA0A0J9YX94 578 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 ZBTB5O15062 677 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 IRX3P78415 501 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-204ENST00000512707 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
PFDN1-204ENST00000512707 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
PFDN1-204ENST00000512707 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-204ENST00000512707 KIAA1755Q5JYT7 1200 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 SPRYD7Q5W111 196 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 HHIPL1Q96JK4 782 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 BRMS1Q9HCU9 246 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 SH3GLB2Q9NR46 395 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 HOXC10Q9NYD6 342 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms