RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 CEP95Q96GE4 821 aa25.63■■□□□ 1.69
RNF4-205ENST00000504224 NACAP1Q9BZK3 213 aa25.63■■□□□ 1.69
RNF4-205ENST00000504224 PDLIM7Q9NR12 457 aa25.63■■□□□ 1.69
RNF4-205ENST00000504224 ISY1Q9ULR0 285 aaKnown RBP25.63■■□□□ 1.69
RNF4-205ENST00000504224 PHF24Q9UPV7 400 aa25.63■■□□□ 1.69
RNF4-205ENST00000504224 RIPK3Q9Y572 518 aa25.63■■□□□ 1.69
RNF4-205ENST00000504224 ZNFX1Q9P2E3 1918 aaKnown RBP25.63■■□□□ 1.69
RNF4-205ENST00000504224 IGKV6D-41A0A0C4DH26 115 aa25.62■■□□□ 1.69
RNF4-205ENST00000504224 ERC2O15083 957 aa25.62■■□□□ 1.69
RNF4-205ENST00000504224 ZNF865P0CJ78 1059 aaPredicted RBP25.62■■□□□ 1.69
RNF4-205ENST00000504224 TLE2Q04725 743 aa25.62■■□□□ 1.69
RNF4-205ENST00000504224 IFNL3Q8IZI9 196 aa25.62■■□□□ 1.69
RNF4-205ENST00000504224 LRRC47Q8N1G4 583 aaKnown RBP25.62■■□□□ 1.69
RNF4-205ENST00000504224 GREB1LQ9C091 1923 aaPredicted RBP25.61■■□□□ 1.69
RNF4-205ENST00000504224 SH3RF1Q7Z6J0 888 aa25.61■■□□□ 1.69
RNF4-205ENST00000504224 FAM161BQ96MY7 647 aa25.61■■□□□ 1.69
RNF4-205ENST00000504224 SEC62Q99442 399 aaKnown RBP25.61■■□□□ 1.69
RNF4-205ENST00000504224 FSD1Q9BTV5 496 aa25.61■■□□□ 1.69
RNF4-205ENST00000504224 RAVER2Q9HCJ3 691 aaKnown RBP25.61■■□□□ 1.69
RNF4-205ENST00000504224 MTMR4Q9NYA4 1195 aa25.61■■□□□ 1.69
RNF4-205ENST00000504224 TTC41PQ6P2S7 1318 aa25.61■■□□□ 1.69
RNF4-205ENST00000504224 TTLL1O95922 423 aa25.6■■□□□ 1.69
RNF4-205ENST00000504224 TSPY3P0CV98 308 aa25.6■■□□□ 1.69
RNF4-205ENST00000504224 TSPY8P0CW00 308 aa25.6■■□□□ 1.69
RNF4-205ENST00000504224 SHHQ15465 462 aa25.6■■□□□ 1.69
RNF4-205ENST00000504224 FEM1BQ9UK73 627 aa25.6■■□□□ 1.69
RNF4-205ENST00000504224 ZHX1Q9UKY1 873 aaPredicted RBP25.6■■□□□ 1.69
RNF4-205ENST00000504224 COL6A3P12111 3177 aa25.59■■□□□ 1.69
RNF4-205ENST00000504224 TRIM43BA6NCK2 446 aa25.59■■□□□ 1.69
RNF4-205ENST00000504224 SLC3A2P08195 630 aaKnown RBP25.59■■□□□ 1.69
RNF4-205ENST00000504224 PDE4BQ07343 736 aa25.59■■□□□ 1.69
RNF4-205ENST00000504224 C9orf50Q5SZB4 431 aa25.59■■□□□ 1.69
RNF4-205ENST00000504224 C1orf53Q5VUE5 145 aa25.59■■□□□ 1.69
RNF4-205ENST00000504224 OTUD7AQ8TE49 926 aaPredicted RBP25.59■■□□□ 1.69
RNF4-205ENST00000504224 TRIM43Q96BQ3 446 aaPredicted RBP25.59■■□□□ 1.69
RNF4-205ENST00000504224 NAPBQ9H115 298 aa25.59■■□□□ 1.69
RNF4-205ENST00000504224 FAM184BQ9ULE4 1060 aa25.59■■□□□ 1.69
RNF4-205ENST00000504224 A0A1W2PQ45 241 aaPredicted RBP25.58■■□□□ 1.69
RNF4-205ENST00000504224 A0A1W2PQY0 241 aa25.58■■□□□ 1.69
RNF4-205ENST00000504224 POTEB2H3BUK9 544 aa25.58■■□□□ 1.69
RNF4-205ENST00000504224 SLFN13Q68D06 897 aa25.58■■□□□ 1.69
RNF4-205ENST00000504224 ANKRD35Q8N283 1001 aa25.58■■□□□ 1.69
RNF4-205ENST00000504224 MSL3Q8N5Y2 521 aaKnown RBP25.58■■□□□ 1.69
RNF4-205ENST00000504224 MKL1Q969V6 931 aa25.58■■□□□ 1.69
RNF4-205ENST00000504224 PCDHB15Q9Y5E8 787 aa25.58■■□□□ 1.69
RNF4-205ENST00000504224 SYNGAP1Q96PV0 1343 aa25.58■■□□□ 1.69
RNF4-205ENST00000504224 LTBP2Q14767 1821 aa25.58■■□□□ 1.68
RNF4-205ENST00000504224 PLXNA1Q9UIW2 1896 aa25.57■■□□□ 1.68
RNF4-205ENST00000504224 ATP2A1O14983 1001 aa25.57■■□□□ 1.68
RNF4-205ENST00000504224 PQBP1O60828 265 aaKnown RBP25.57■■□□□ 1.68
RNF4-205ENST00000504224 SNAI1O95863 264 aaPredicted RBP25.57■■□□□ 1.68
RNF4-205ENST00000504224 FAM109BQ6ICB4 259 aaPredicted RBP25.57■■□□□ 1.68
RNF4-205ENST00000504224 GMCL1P1Q8NEA9 526 aa25.57■■□□□ 1.68
RNF4-205ENST00000504224 PI4K2BQ8TCG2 481 aa25.57■■□□□ 1.68
RNF4-205ENST00000504224 CHMP4CQ96CF2 233 aa25.57■■□□□ 1.68
RNF4-205ENST00000504224 SLC38A10Q9HBR0 1119 aa25.57■■□□□ 1.68
RNF4-205ENST00000504224 TACC3Q9Y6A5 838 aa25.57■■□□□ 1.68
RNF4-205ENST00000504224 SMCHD1A6NHR9 2005 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 DNAJC25-GNG10A0A024R161 153 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 CLTBP09497 229 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 BMP3P12645 472 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 TFAP4Q01664 338 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 PPARAQ07869 468 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 ZNF697Q5TEC3 545 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 NEDD1Q8NHV4 660 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 HOMER2Q9NSB8 354 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 SYNPO2Q9UMS6 1093 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 SYNRGQ9UMZ2 1314 aa25.56■■□□□ 1.68
RNF4-205ENST00000504224 ADAMTS4O75173 837 aa25.55■■□□□ 1.68
RNF4-205ENST00000504224 IKQ13123 557 aaPredicted RBP25.55■■□□□ 1.68
RNF4-205ENST00000504224 ZMYM1Q5SVZ6 1142 aa25.55■■□□□ 1.68
RNF4-205ENST00000504224 MAMDC4Q6UXC1 1216 aa25.55■■□□□ 1.68
RNF4-205ENST00000504224 FBXO40Q9UH90 709 aa25.55■■□□□ 1.68
RNF4-205ENST00000504224 TMEM232C9JQI7 657 aa25.54■■□□□ 1.68
RNF4-205ENST00000504224 MX1P20591 662 aa25.54■■□□□ 1.68
RNF4-205ENST00000504224 ACLYP53396 1101 aa25.54■■□□□ 1.68
RNF4-205ENST00000504224 ZNF467Q7Z7K2 595 aaPredicted RBP25.54■■□□□ 1.68
RNF4-205ENST00000504224 CHST13Q8NET6 341 aa25.54■■□□□ 1.68
RNF4-205ENST00000504224 GUCD1Q96NT3 240 aa25.54■■□□□ 1.68
RNF4-205ENST00000504224 TSEN34Q9BSV6 310 aaKnown RBP25.54■■□□□ 1.68
RNF4-205ENST00000504224 STARD7Q9NQZ5 370 aa25.54■■□□□ 1.68
RNF4-205ENST00000504224 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.54■■□□□ 1.68
RNF4-205ENST00000504224 ZBTB47Q9UFB7 747 aaPredicted RBP25.54■■□□□ 1.68
RNF4-205ENST00000504224 MYH4Q9Y623 1939 aa25.53■■□□□ 1.68
RNF4-205ENST00000504224 RAG1P15918 1043 aa25.53■■□□□ 1.68
RNF4-205ENST00000504224 OAZ1P54368 228 aa25.53■■□□□ 1.68
RNF4-205ENST00000504224 ACVR2BQ13705 512 aa25.53■■□□□ 1.68
RNF4-205ENST00000504224 NUP133Q8WUM0 1156 aa25.53■■□□□ 1.68
RNF4-205ENST00000504224 TMEM39AQ9NV64 488 aa25.53■■□□□ 1.68
RNF4-205ENST00000504224 PLIN4Q96Q06 1357 aa25.53■■□□□ 1.68
RNF4-205ENST00000504224 ITGB8P26012 769 aa25.52■■□□□ 1.68
RNF4-205ENST00000504224 STAT2P52630 851 aa25.52■■□□□ 1.68
RNF4-205ENST00000504224 KCNA10Q16322 511 aa25.52■■□□□ 1.68
RNF4-205ENST00000504224 CCDC129Q6ZRS4 1044 aa25.52■■□□□ 1.68
RNF4-205ENST00000504224 DCDC2CA8MYV0 355 aa25.51■■□□□ 1.67
RNF4-205ENST00000504224 DUSP11O75319 330 aaKnown RBP25.51■■□□□ 1.67
RNF4-205ENST00000504224 C6orf222P0C671 652 aaPredicted RBP25.51■■□□□ 1.67
RNF4-205ENST00000504224 SLC1A4P43007 532 aa25.51■■□□□ 1.67
RNF4-205ENST00000504224 KLHDC9Q8NEP7 349 aa25.51■■□□□ 1.67
RNF4-205ENST00000504224 CHURC1Q8WUH1 139 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms