RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 MMP19Q99542 508 aa20.83■□□□□ 0.93
NECAB3-216ENST00000498353 NBPF3Q9H094 633 aa20.83■□□□□ 0.93
NECAB3-216ENST00000498353 SLC38A10Q9HBR0 1119 aa20.83■□□□□ 0.93
NECAB3-216ENST00000498353 TCP11L1Q9NUJ3 509 aa20.83■□□□□ 0.93
NECAB3-216ENST00000498353 H0YGN5 161 aa20.82■□□□□ 0.92
NECAB3-216ENST00000498353 FDX1P10109 184 aa20.82■□□□□ 0.92
NECAB3-216ENST00000498353 SLC1A4P43007 532 aa20.82■□□□□ 0.92
NECAB3-216ENST00000498353 KCTD2Q14681 263 aa20.82■□□□□ 0.92
NECAB3-216ENST00000498353 SNRNP48Q6IEG0 339 aaKnown RBP20.82■□□□□ 0.92
NECAB3-216ENST00000498353 MAML3Q96JK9 1138 aa20.82■□□□□ 0.92
NECAB3-216ENST00000498353 TOMM22Q9NS69 142 aa20.82■□□□□ 0.92
NECAB3-216ENST00000498353 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
NECAB3-216ENST00000498353 TMEM232C9JQI7 657 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 MSCO60682 206 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 PLA2G6O60733 806 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 CYBAP13498 195 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 MCCP23508 829 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 OAZ1P54368 228 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 HAND2P61296 217 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 AKNAD1Q5T1N1 836 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 TTC22Q5TAA0 569 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 MFSD6Q6ZSS7 791 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 TRPV1Q8NER1 839 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 CHURC1Q8WUH1 139 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 STAG1Q8WVM7 1258 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 DDX20Q9UHI6 824 aaKnown RBP20.81■□□□□ 0.92
NECAB3-216ENST00000498353 DIS3Q9Y2L1 958 aaKnown RBP20.81■□□□□ 0.92
NECAB3-216ENST00000498353 RIPK3Q9Y572 518 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 CTDP1Q9Y5B0 961 aaPredicted RBP20.81■□□□□ 0.92
NECAB3-216ENST00000498353 NR2E3Q9Y5X4 410 aa20.81■□□□□ 0.92
NECAB3-216ENST00000498353 ZNF213O14771 459 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 GSPT1P15170 499 aaKnown RBP20.8■□□□□ 0.92
NECAB3-216ENST00000498353 STAT2P52630 851 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 ZNF792Q3KQV3 632 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 RRP12Q5JTH9 1297 aaKnown RBP20.8■□□□□ 0.92
NECAB3-216ENST00000498353 RCSD1Q6JBY9 416 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 FAM160B2Q86V87 743 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 CPXCR1Q8N123 301 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 DSCC1Q9BVC3 393 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 RNF41Q9H4P4 317 aaPredicted RBP20.8■□□□□ 0.92
NECAB3-216ENST00000498353 C11orf49Q9H6J7 331 aa20.8■□□□□ 0.92
NECAB3-216ENST00000498353 PGK2P07205 417 aa20.79■□□□□ 0.92
NECAB3-216ENST00000498353 CNGA1P29973 690 aa20.79■□□□□ 0.92
NECAB3-216ENST00000498353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.79■□□□□ 0.92
NECAB3-216ENST00000498353 TBC1D10CQ8IV04 446 aa20.79■□□□□ 0.92
NECAB3-216ENST00000498353 RAVER2Q9HCJ3 691 aaKnown RBP20.79■□□□□ 0.92
NECAB3-216ENST00000498353 EVI5O60447 810 aa20.78■□□□□ 0.92
NECAB3-216ENST00000498353 COL6A1P12109 1028 aa20.78■□□□□ 0.92
NECAB3-216ENST00000498353 NT5C2P49902 561 aa20.78■□□□□ 0.92
NECAB3-216ENST00000498353 KCTD1Q719H9 257 aa20.78■□□□□ 0.92
NECAB3-216ENST00000498353 TTC14Q96N46 770 aa20.78■□□□□ 0.92
NECAB3-216ENST00000498353 SEPT4O43236 478 aa20.77■□□□□ 0.92
NECAB3-216ENST00000498353 TOP1P11387 765 aaKnown RBP20.77■□□□□ 0.92
NECAB3-216ENST00000498353 CHST13Q8NET6 341 aa20.77■□□□□ 0.92
NECAB3-216ENST00000498353 DCAF4Q8WV16 495 aa20.77■□□□□ 0.92
NECAB3-216ENST00000498353 TMEM47Q9BQJ4 181 aa20.77■□□□□ 0.92
NECAB3-216ENST00000498353 TINF2Q9BSI4 451 aa20.77■□□□□ 0.92
NECAB3-216ENST00000498353 FBXO40Q9UH90 709 aa20.77■□□□□ 0.92
NECAB3-216ENST00000498353 NRBP1Q9UHY1 535 aa20.77■□□□□ 0.92
NECAB3-216ENST00000498353 ISY1Q9ULR0 285 aaKnown RBP20.77■□□□□ 0.92
NECAB3-216ENST00000498353 DNAJC25-GNG10A0A024R161 153 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 SLC4A3P48751 1232 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 IKQ13123 557 aaPredicted RBP20.76■□□□□ 0.91
NECAB3-216ENST00000498353 PRAMEF19Q5SWL8 479 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 ESR2Q92731 530 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 CHMP4CQ96CF2 233 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 DDX11Q96FC9 970 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 PFASO15067 1338 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 ZNF536O15090 1300 aa20.76■□□□□ 0.91
NECAB3-216ENST00000498353 HABP4Q5JVS0 413 aaKnown RBP20.75■□□□□ 0.91
NECAB3-216ENST00000498353 RASGRP2Q7LDG7 609 aa20.75■□□□□ 0.91
NECAB3-216ENST00000498353 MSL3Q8N5Y2 521 aaKnown RBP20.75■□□□□ 0.91
NECAB3-216ENST00000498353 IL25Q9H293 177 aa20.75■□□□□ 0.91
NECAB3-216ENST00000498353 CTNNA3Q9UI47 895 aa20.75■□□□□ 0.91
NECAB3-216ENST00000498353 PRR12Q9ULL5 1215 aa20.75■□□□□ 0.91
NECAB3-216ENST00000498353 COLQQ9Y215 455 aaPredicted RBP20.75■□□□□ 0.91
NECAB3-216ENST00000498353 NEDD4P46934 1319 aa20.75■□□□□ 0.91
NECAB3-216ENST00000498353 IMMTQ16891 758 aaKnown RBP20.74■□□□□ 0.91
NECAB3-216ENST00000498353 BTNL9Q6UXG8 535 aa20.74■□□□□ 0.91
NECAB3-216ENST00000498353 ZNFX1Q9P2E3 1918 aaKnown RBP20.74■□□□□ 0.91
NECAB3-216ENST00000498353 RAD50Q92878 1312 aa20.74■□□□□ 0.91
NECAB3-216ENST00000498353 MAMDC4Q6UXC1 1216 aa20.73■□□□□ 0.91
NECAB3-216ENST00000498353 DGKHQ86XP1 1220 aa20.73■□□□□ 0.91
NECAB3-216ENST00000498353 ANKRD35Q8N283 1001 aa20.73■□□□□ 0.91
NECAB3-216ENST00000498353 AGBL1Q96MI9 1066 aa20.73■□□□□ 0.91
NECAB3-216ENST00000498353 MTMR7Q9Y216 660 aa20.73■□□□□ 0.91
NECAB3-216ENST00000498353 DNM1LO00429 736 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 SLC34A2O95436 690 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 CHMLP26374 656 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 CCDC96Q2M329 555 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 TKFCQ3LXA3 575 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 CCDC178Q5BJE1 867 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 ZNF467Q7Z7K2 595 aaPredicted RBP20.72■□□□□ 0.91
NECAB3-216ENST00000498353 ARRDC4Q8NCT1 418 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 ACAD9Q9H845 621 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 SYNGAP1Q96PV0 1343 aa20.72■□□□□ 0.91
NECAB3-216ENST00000498353 CEP290O15078 2479 aa20.71■□□□□ 0.91
NECAB3-216ENST00000498353 KDM4AO75164 1064 aa20.71■□□□□ 0.91
NECAB3-216ENST00000498353 ZNF865P0CJ78 1059 aaPredicted RBP20.71■□□□□ 0.91
NECAB3-216ENST00000498353 SNHG28P0DPA3 235 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms