RNA–Protein interactions for RNA: ENST00000497952.5

HDAC10-220, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-220ENST00000497952 TRIM60Q495X7 471 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 SLC39A5Q6ZMH5 540 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 Q7L0L9 218 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 LENG1Q96BZ8 264 aaPredicted RBP12.88□□□□□ -0.35
HDAC10-220ENST00000497952 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
HDAC10-220ENST00000497952 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 PRDM5Q9NQX1 630 aaPredicted RBP12.88□□□□□ -0.35
HDAC10-220ENST00000497952 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 RIPK3Q9Y572 518 aa12.88□□□□□ -0.35
HDAC10-220ENST00000497952 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
HDAC10-220ENST00000497952 PLIN4Q96Q06 1357 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 ZBED4O75132 1171 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 TTLL1O95922 423 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 PGK1P00558 417 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
HDAC10-220ENST00000497952 RARBP10826 455 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 TFAP4Q01664 338 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 ANKRD45Q5TZF3 282 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 PRPF38AQ8NAV1 312 aaKnown RBP12.87□□□□□ -0.35
HDAC10-220ENST00000497952 NRBP1Q9UHY1 535 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 CNPY2Q9Y2B0 182 aa12.87□□□□□ -0.35
HDAC10-220ENST00000497952 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
HDAC10-220ENST00000497952 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
HDAC10-220ENST00000497952 AKR1A1P14550 325 aa12.86□□□□□ -0.35
HDAC10-220ENST00000497952 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
HDAC10-220ENST00000497952 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
HDAC10-220ENST00000497952 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
HDAC10-220ENST00000497952 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
HDAC10-220ENST00000497952 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
HDAC10-220ENST00000497952 SALL3Q9BXA9 1300 aa12.86□□□□□ -0.35
HDAC10-220ENST00000497952 SZT2Q5T011 3432 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 BMP3P12645 472 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 IKQ13123 557 aaPredicted RBP12.85□□□□□ -0.35
HDAC10-220ENST00000497952 RNF180Q86T96 592 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 MKL1Q969V6 931 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 SLC38A10Q9HBR0 1119 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 HOMER2Q9NSB8 354 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
HDAC10-220ENST00000497952 LCTP09848 1927 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 TSPY2A6NKD2 308 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 ATP2A1O14983 1001 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 FOXP2O15409 715 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 SNAI1O95863 264 aaPredicted RBP12.84□□□□□ -0.35
HDAC10-220ENST00000497952 SNX17Q15036 470 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 VPS53Q5VIR6 699 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 RASGRP2Q7LDG7 609 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 ANKRD35Q8N283 1001 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 SYNPO2Q9UMS6 1093 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC10-220ENST00000497952 LRRC37A2A6NM11 1700 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 SYNGAP1Q96PV0 1343 aa12.84□□□□□ -0.35
HDAC10-220ENST00000497952 A0A1W2PQ45 241 aaPredicted RBP12.83□□□□□ -0.36
HDAC10-220ENST00000497952 A0A1W2PQY0 241 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 NMT2O60551 498 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 MCCP23508 829 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 SLC1A4P43007 532 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 STAT2P52630 851 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 TLE2Q04725 743 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 SLC17A8Q8NDX2 589 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 BADQ92934 168 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 EVI5LQ96CN4 794 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
HDAC10-220ENST00000497952 FBXO40Q9UH90 709 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 FAM184BQ9ULE4 1060 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 SYNRGQ9UMZ2 1314 aa12.83□□□□□ -0.36
HDAC10-220ENST00000497952 TRIM43BA6NCK2 446 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 RANBP6O60518 1105 aaKnown RBP12.82□□□□□ -0.36
HDAC10-220ENST00000497952 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
HDAC10-220ENST00000497952 ADAMTS4O75173 837 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 PDE1AP54750 535 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 SNAP25P60880 206 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 SHHQ15465 462 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 CCDC174Q6PII3 467 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 ARMCX2Q7L311 632 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 MSL3Q8N5Y2 521 aaKnown RBP12.82□□□□□ -0.36
HDAC10-220ENST00000497952 CHST13Q8NET6 341 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 CHURC1Q8WUH1 139 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 TRIM43Q96BQ3 446 aaPredicted RBP12.82□□□□□ -0.36
HDAC10-220ENST00000497952 FGD4Q96M96 766 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
HDAC10-220ENST00000497952 TOMM22Q9NS69 142 aa12.82□□□□□ -0.36
HDAC10-220ENST00000497952 RNF146Q9NTX7 359 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms