RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TSPYL5Q86VY4 417 aaPredicted RBP7.19□□□□□ -1.26
VPS36-206ENST00000497149 ZNF655Q8N720 491 aaPredicted RBP7.19□□□□□ -1.26
VPS36-206ENST00000497149 PPP1R14AQ96A00 147 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 SGSM3Q96HU1 749 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 DSCC1Q9BVC3 393 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 HDAC8Q9BY41 377 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 NOL6Q9H6R4 1146 aaKnown RBP7.19□□□□□ -1.26
VPS36-206ENST00000497149 AKT3Q9Y243 479 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 EMC9Q9Y3B6 208 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 KDM2BQ8NHM5 1336 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 A0A1W2PQU0 124 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 MEIS1O00470 390 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 NOP56O00567 594 aaKnown RBP7.18□□□□□ -1.26
VPS36-206ENST00000497149 COBLO75128 1261 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 TPP2P29144 1249 aaPredicted RBP7.18□□□□□ -1.26
VPS36-206ENST00000497149 PPP2R5DQ14738 602 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 LRRC47Q8N1G4 583 aaKnown RBP7.18□□□□□ -1.26
VPS36-206ENST00000497149 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 MRGPRX3Q96LB0 322 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 SPATA9Q9BWV2 254 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 LGR4Q9BXB1 951 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 CGGBP1Q9UFW8 167 aaPredicted RBP7.18□□□□□ -1.26
VPS36-206ENST00000497149 VAV3Q9UKW4 847 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 SF3B6Q9Y3B4 125 aaKnown RBP7.18□□□□□ -1.26
VPS36-206ENST00000497149 PITPNM2Q9BZ72 1349 aa7.18□□□□□ -1.26
VPS36-206ENST00000497149 GSNP06396 782 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 CTSKP43235 329 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 PRKCQQ04759 706 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 AOC3Q16853 763 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 GAB4Q2WGN9 574 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 POMZP3Q6PJE2 187 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 ZNF227Q86WZ6 799 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 JMYQ8N9B5 988 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 HRASLS5Q96KN8 279 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 RNPC3Q96LT9 517 aaKnown RBP7.17□□□□□ -1.26
VPS36-206ENST00000497149 ATP13A1Q9HD20 1204 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 BSDC1Q9NW68 430 aaPredicted RBP7.17□□□□□ -1.26
VPS36-206ENST00000497149 TBX22Q9Y458 520 aa7.17□□□□□ -1.26
VPS36-206ENST00000497149 MED26O95402 600 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 CAPNS1P04632 268 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 TMPRSS7Q7RTY8 843 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 JAZF1Q86VZ6 243 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 TRIM59Q8IWR1 403 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 CRACR2BQ8N4Y2 399 aaPredicted RBP7.16□□□□□ -1.26
VPS36-206ENST00000497149 USHBP1Q8N6Y0 703 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 ASB11Q8WXH4 323 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 ZDHHC15Q96MV8 337 aa7.16□□□□□ -1.26
VPS36-206ENST00000497149 CWC22Q9HCG8 908 aaKnown RBP7.16□□□□□ -1.26
VPS36-206ENST00000497149 MRPL42Q9Y6G3 142 aaKnown RBP7.16□□□□□ -1.26
VPS36-206ENST00000497149 H0Y8X5 98 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 TBX1O43435 398 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 SMARCA5O60264 1052 aaPredicted RBP7.15□□□□□ -1.26
VPS36-206ENST00000497149 ADCY3O60266 1144 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 KCNH1O95259 989 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 FAM153BP0C7A2 387 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 PPP2R2AP63151 447 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 GRB10Q13322 594 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 HSP90AA2PQ14568 343 aaPredicted RBP7.15□□□□□ -1.26
VPS36-206ENST00000497149 CWF19L1Q69YN2 538 aaKnown RBP7.15□□□□□ -1.26
VPS36-206ENST00000497149 ZBTB38Q8NAP3 1195 aaPredicted RBP7.15□□□□□ -1.26
VPS36-206ENST00000497149 SH3TC2Q8TF17 1288 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 THAP3Q8WTV1 239 aaPredicted RBP7.15□□□□□ -1.26
VPS36-206ENST00000497149 DUSP13Q9UII6 198 aa7.15□□□□□ -1.26
VPS36-206ENST00000497149 TMA7Q9Y2S6 64 aaKnown RBP7.15□□□□□ -1.26
VPS36-206ENST00000497149 VAMP4O75379 141 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 ESR1P03372 595 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 VAV1P15498 845 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 BMP8BP34820 402 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 POU4F1Q01851 419 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 BNIP3Q12983 259 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 LONRF2Q1L5Z9 754 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 C2orf27AQ580R0 203 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 CRTC3Q6UUV7 619 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 CREG2Q8IUH2 290 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 LINC00116Q8NCU8 138 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 BCL7CQ8WUZ0 217 aaPredicted RBP7.14□□□□□ -1.27
VPS36-206ENST00000497149 KANSL2Q9H9L4 492 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 ARHGEF4Q9NR80 690 aa7.14□□□□□ -1.27
VPS36-206ENST00000497149 PRNPP04156 253 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 SSTR4P31391 388 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 GRIA2P42262 883 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 NOP2P46087 812 aaKnown RBP7.13□□□□□ -1.27
VPS36-206ENST00000497149 CD97P48960 835 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 PCBP3P57721 371 aaKnown RBP7.13□□□□□ -1.27
VPS36-206ENST00000497149 AMPD2Q01433 879 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 GTF2IRD2BQ6EKJ0 949 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 GTF2IRD2Q86UP8 949 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 DTX1Q86Y01 620 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 STK11IPQ8N1F8 1099 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 PCDHA11Q9Y5I1 949 aa7.13□□□□□ -1.27
VPS36-206ENST00000497149 CADPSQ9ULU8 1353 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 SSU72P8A0A1W2PR75 194 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 SYPP08247 313 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 LTKP29376 864 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 DPY19L1Q2PZI1 675 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 RNF111Q6ZNA4 994 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 NLGN1Q8N2Q7 840 aa7.12□□□□□ -1.27
VPS36-206ENST00000497149 BTN2A2Q8WVV5 523 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms