RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ZBED4O75132 1171 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 TTLL1O95922 423 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 SYN1P17600 705 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 FXR1P51114 621 aaKnown RBP eCLIP11.4□□□□□ -0.58
MSH5-218ENST00000494646 NMIQ13287 307 aaPredicted RBP11.4□□□□□ -0.58
MSH5-218ENST00000494646 MCMDC2Q4G0Z9 681 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 SNRNP48Q6IEG0 339 aaKnown RBP11.4□□□□□ -0.58
MSH5-218ENST00000494646 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 HOMEZQ8IX15 550 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 SMC5Q8IY18 1101 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
MSH5-218ENST00000494646 MAML3Q96JK9 1138 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.58
MSH5-218ENST00000494646 RAVER2Q9HCJ3 691 aaKnown RBP11.4□□□□□ -0.58
MSH5-218ENST00000494646 ZNF214Q9UL59 606 aaPredicted RBP11.4□□□□□ -0.58
MSH5-218ENST00000494646 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
MSH5-218ENST00000494646 CTDP1Q9Y5B0 961 aaPredicted RBP11.4□□□□□ -0.58
MSH5-218ENST00000494646 PFASO15067 1338 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 TSPY2A6NKD2 308 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 TMEM232C9JQI7 657 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 RANBP6O60518 1105 aaKnown RBP11.39□□□□□ -0.59
MSH5-218ENST00000494646 NMT2O60551 498 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 IGHA2P01877 340 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 FGAP02671 866 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 BMP3P12645 472 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 CYBAP13498 195 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 MCCP23508 829 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
MSH5-218ENST00000494646 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
MSH5-218ENST00000494646 AAMPQ13685 434 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 KCTD2Q14681 263 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 RRP12Q5JTH9 1297 aaKnown RBP11.39□□□□□ -0.59
MSH5-218ENST00000494646 GJC2Q5T442 439 aaPredicted RBP11.39□□□□□ -0.59
MSH5-218ENST00000494646 OLFML2BQ68BL8 750 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 PLEKHM2Q8IWE5 1019 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 ABRAQ8N0Z2 381 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 FEM1BQ9UK73 627 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 STX8Q9UNK0 236 aa11.39□□□□□ -0.59
MSH5-218ENST00000494646 MCM3APO60318 1980 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 HSPD1P10809 573 aaKnown RBP11.38□□□□□ -0.59
MSH5-218ENST00000494646 COL6A1P12109 1028 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 TAL1P17542 331 aaPredicted RBP11.38□□□□□ -0.59
MSH5-218ENST00000494646 HAND2P61296 217 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 LRRC26Q2I0M4 334 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 ZNF792Q3KQV3 632 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
MSH5-218ENST00000494646 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
MSH5-218ENST00000494646 DDX11Q96FC9 970 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
MSH5-218ENST00000494646 GTF3C3Q9Y5Q9 886 aa11.38□□□□□ -0.59
MSH5-218ENST00000494646 ZNF236Q9UL36 1845 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 SEPT4O43236 478 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 MSCO60682 206 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 SDSP20132 328 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 SNAP25P60880 206 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 NUCB1Q02818 461 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
MSH5-218ENST00000494646 ALX1Q15699 326 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 KCTD1Q719H9 257 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 GMCL1P1Q8NEA9 526 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 TINF2Q9BSI4 451 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 TEX13BQ9BXU2 312 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 PRO3102Q9H379 93 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 SLC38A10Q9HBR0 1119 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 ANAPC4Q9UJX5 808 aa11.37□□□□□ -0.59
MSH5-218ENST00000494646 SLC1A4P43007 532 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 RCSD1Q6JBY9 416 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 CWC27Q6UX04 472 aaKnown RBP11.36□□□□□ -0.59
MSH5-218ENST00000494646 RASGRP2Q7LDG7 609 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 ARRDC4Q8NCT1 418 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 CHURC1Q8WUH1 139 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 STAG1Q8WVM7 1258 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 FERMT2Q96AC1 680 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 HOMER2Q9NSB8 354 aa11.36□□□□□ -0.59
MSH5-218ENST00000494646 DNM1LO00429 736 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 FGRP09769 529 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 COPB2P35606 906 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 STAT2P52630 851 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 CCDC174Q6PII3 467 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
MSH5-218ENST00000494646 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 GDF15Q99988 308 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 DIS3Q9Y2L1 958 aaKnown RBP11.35□□□□□ -0.59
MSH5-218ENST00000494646 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
MSH5-218ENST00000494646 PLIN4Q96Q06 1357 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 KBTBD13C9JR72 458 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 ATP2A1O14983 1001 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 ORC4O43929 436 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 ZNF865P0CJ78 1059 aaPredicted RBP11.34□□□□□ -0.59
MSH5-218ENST00000494646 ADCYAP1R1P41586 468 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 MAGEA10P43363 369 aaPredicted RBP11.34□□□□□ -0.59
MSH5-218ENST00000494646 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
MSH5-218ENST00000494646 LRRC41Q15345 812 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 TTBK2Q6IQ55 1244 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms