RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CFAP53Q96M91 514 aa6.95□□□□□ -1.3
PTPN4-210ENST00000485247 DEFB118Q96PH6 123 aa6.95□□□□□ -1.3
PTPN4-210ENST00000485247 ISCA1Q9BUE6 129 aa6.95□□□□□ -1.3
PTPN4-210ENST00000485247 CPA4Q9UI42 421 aa6.95□□□□□ -1.3
PTPN4-210ENST00000485247 TIMELESSQ9UNS1 1208 aa6.95□□□□□ -1.3
PTPN4-210ENST00000485247 NUDCQ9Y266 331 aa6.95□□□□□ -1.3
PTPN4-210ENST00000485247 ZNF804BA4D1E1 1349 aa6.95□□□□□ -1.3
PTPN4-210ENST00000485247 TMEM265A0A087WTH1 108 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 F8W031 263 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-210ENST00000485247 IGFBP4P22692 258 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 AMPD1P23109 780 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 DGKGP49619 791 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 PRKCZQ05513 592 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 VGLL4Q14135 290 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 RASA3Q14644 834 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 C17orf99Q6UX52 265 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 LINC00114Q6XXX2 140 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 NECAB2Q7Z6G3 386 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 TXNRD3Q86VQ6 643 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 ANKRD18AQ8IVF6 992 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 MAFAQ8NHW3 353 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-210ENST00000485247 DIS3LQ8TF46 1054 aaKnown RBP6.94□□□□□ -1.3
PTPN4-210ENST00000485247 PRMT6Q96LA8 375 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-210ENST00000485247 MDFIQ99750 246 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 COA1Q9GZY4 146 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 BRD7Q9NPI1 651 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 TSPYL4Q9UJ04 414 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 AOX1Q06278 1338 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 MED23Q9ULK4 1368 aa6.94□□□□□ -1.3
PTPN4-210ENST00000485247 CETPP11597 493 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 COL8A1P27658 744 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 WEE1P30291 646 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 CFAP100Q494V2 611 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 CCDC152Q4G0S7 254 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 CHSY3Q70JA7 882 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 RAB44Q7Z6P3 723 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-210ENST00000485247 SYT9Q86SS6 491 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 PLBD2Q8NHP8 589 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 JARID2Q92833 1246 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-210ENST00000485247 CEP63Q96MT8 703 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 MKL2Q9ULH7 1088 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 ZMIZ1Q9ULJ6 1067 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 PRR12Q9ULL5 1215 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 GABRQQ9UN88 632 aa6.93□□□□□ -1.3
PTPN4-210ENST00000485247 ALPK3Q96L96 1907 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 SPTBN5Q9NRC6 3674 aaKnown RBP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 OTOFQ9HC10 1997 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 ADCY3O60266 1144 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 ELNP15502 786 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 KLRK1P26718 216 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 CCT4P50991 539 aaKnown RBP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 RBM5P52756 815 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 FAM109BQ6ICB4 259 aaPredicted RBP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 CERS5Q8N5B7 392 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 ZBTB38Q8NAP3 1195 aaPredicted RBP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 CDX2Q99626 313 aaPredicted RBP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 ZMYND15Q9H091 742 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 SUV39H2Q9H5I1 410 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 ZCCHC17Q9NP64 241 aaKnown RBP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 CHPF2Q9P2E5 772 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 MINPP1Q9UNW1 487 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 NOVA2Q9UNW9 492 aaKnown RBP6.92□□□□□ -1.3
PTPN4-210ENST00000485247 CSADQ9Y600 493 aa6.92□□□□□ -1.3
PTPN4-210ENST00000485247 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.91□□□□□ -1.3
PTPN4-210ENST00000485247 NEFMP07197 916 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 FCGRTP55899 365 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 SPEM2Q0P670 501 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 MAP3K12Q12852 859 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 SNAPC2Q13487 334 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 RTN1Q16799 776 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 PLA2G4EQ3MJ16 856 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 GPAT2Q6NUI2 795 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 BTLAQ7Z6A9 289 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPN4-210ENST00000485247 FAM200AQ8TCP9 573 aa6.91□□□□□ -1.3
PTPN4-210ENST00000485247 PAK6Q9NQU5 681 aaPredicted RBP6.91□□□□□ -1.3
PTPN4-210ENST00000485247 PDHXO00330 501 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 PDE8AO60658 829 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 HSP90B1P14625 803 aaKnown RBP6.9□□□□□ -1.3
PTPN4-210ENST00000485247 FLT3LGP49771 235 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 TRIM28Q13263 835 aaKnown RBP6.9□□□□□ -1.3
PTPN4-210ENST00000485247 TNFAIP1Q13829 316 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 KRT24Q2M2I5 525 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 ERO1BQ86YB8 467 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 TEPSINQ96N21 525 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 CDC5LQ99459 802 aaKnown RBP6.9□□□□□ -1.3
PTPN4-210ENST00000485247 TMEM39BQ9GZU3 492 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 DMGDHQ9UI17 866 aaKnown RBP6.9□□□□□ -1.3
PTPN4-210ENST00000485247 JAG2Q9Y219 1238 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 SNCAIPQ9Y6H5 919 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 ADGRA2Q96PE1 1338 aa6.9□□□□□ -1.3
PTPN4-210ENST00000485247 TTC28Q96AY4 2481 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 ELOA3CA0A087WX78 387 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-210ENST00000485247 KRBA1A5PL33 1030 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 ELOA3DA6NLF2 546 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-210ENST00000485247 TCP10L2B9ZVM9 353 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 SIN3BO75182 1162 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 CAPN2P17655 700 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms