RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PXYLP1Q8TE99 480 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 USP6NLQ92738 828 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 MROH8Q9H579 483 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 GABRQQ9UN88 632 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 MYH4Q9Y623 1939 aa18.64■□□□□ 0.58
UPF3A-208ENST00000484246 TMEM232C9JQI7 657 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 XRCC5P13010 732 aaKnown RBP18.64■□□□□ 0.57
UPF3A-208ENST00000484246 ANTXR2P58335 489 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 GRB14Q14449 540 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 SART3Q15020 963 aaKnown RBP18.64■□□□□ 0.57
UPF3A-208ENST00000484246 GPATCH4Q5T3I0 446 aaKnown RBP18.64■□□□□ 0.57
UPF3A-208ENST00000484246 RASGRP2Q7LDG7 609 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 ABRAQ8N0Z2 381 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 KAT14Q9H8E8 782 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 HTTP42858 3142 aa18.64■□□□□ 0.57
UPF3A-208ENST00000484246 SLC15A5A6NIM6 579 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 HSPA4P34932 840 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 KRT32Q14532 448 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 CCDC96Q2M329 555 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 IFIT1BQ5T764 474 aaKnown RBP18.63■□□□□ 0.57
UPF3A-208ENST00000484246 KCTD1Q719H9 257 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 CCAR1Q8IX12 1150 aaKnown RBP18.63■□□□□ 0.57
UPF3A-208ENST00000484246 RAET1EQ8TD07 263 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 KIFC2Q96AC6 838 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 NUDT12Q9BQG2 462 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 WDR19Q8NEZ3 1342 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 ZNF236Q9UL36 1845 aa18.63■□□□□ 0.57
UPF3A-208ENST00000484246 CCDC85CA6NKD9 419 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 STRNO43815 780 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 ZBED4O75132 1171 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 HOXC6P09630 235 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 ERCC3P19447 782 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 PTPREP23469 700 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 MCM5P33992 734 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 STAT3P40763 770 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 SLC9C1Q4G0N8 1177 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 ASPRV1Q53RT3 343 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 TMEM87BQ96K49 555 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 PRR12Q9ULL5 1215 aa18.62■□□□□ 0.57
UPF3A-208ENST00000484246 ERICH2A1L162 156 aa18.61■□□□□ 0.57
UPF3A-208ENST00000484246 IFIT3O14879 490 aaKnown RBP18.61■□□□□ 0.57
UPF3A-208ENST00000484246 ZKSCAN1P17029 563 aaPredicted RBP18.61■□□□□ 0.57
UPF3A-208ENST00000484246 GRK4P32298 578 aa18.61■□□□□ 0.57
UPF3A-208ENST00000484246 RASEFQ8IZ41 740 aa18.61■□□□□ 0.57
UPF3A-208ENST00000484246 IGDCC4Q8TDY8 1250 aa18.61■□□□□ 0.57
UPF3A-208ENST00000484246 APBA2Q99767 749 aa18.61■□□□□ 0.57
UPF3A-208ENST00000484246 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
UPF3A-208ENST00000484246 IVNS1ABPQ9Y6Y0 642 aa18.61■□□□□ 0.57
UPF3A-208ENST00000484246 MGAMO43451 1857 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 ZNF536O15090 1300 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 ADCY3O60266 1144 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 ECM2O94769 699 aaPredicted RBP18.6■□□□□ 0.57
UPF3A-208ENST00000484246 RGS2P41220 211 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 MAP2K5Q13163 448 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 WTAPQ15007 396 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 TMEM67Q5HYA8 995 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 NBPF11Q86T75 865 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 TRMT44Q8IYL2 757 aaKnown RBP18.6■□□□□ 0.57
UPF3A-208ENST00000484246 PNMA2Q9UL42 364 aa18.6■□□□□ 0.57
UPF3A-208ENST00000484246 FRMPD2Q68DX3 1309 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-208ENST00000484246 PRC1O43663 620 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 EIF5BO60841 1220 aaKnown RBP18.59■□□□□ 0.57
UPF3A-208ENST00000484246 ABCB7O75027 752 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 LIFRP42702 1097 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 IKQ13123 557 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-208ENST00000484246 PLS1Q14651 629 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 SNRNP48Q6IEG0 339 aaKnown RBP18.59■□□□□ 0.57
UPF3A-208ENST00000484246 TTBK2Q6IQ55 1244 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 NEK1Q96PY6 1258 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 MAP3K14Q99558 947 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 LY9Q9HBG7 655 aa18.59■□□□□ 0.57
UPF3A-208ENST00000484246 CWC22Q9HCG8 908 aaKnown RBP18.59■□□□□ 0.57
UPF3A-208ENST00000484246 ISY1Q9ULR0 285 aaKnown RBP18.59■□□□□ 0.57
UPF3A-208ENST00000484246 SH2B2O14492 632 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-208ENST00000484246 IGHA2P01877 340 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 HMGB1P09429 215 aaKnown RBP18.58■□□□□ 0.56
UPF3A-208ENST00000484246 TROAPQ12815 778 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-208ENST00000484246 TKFCQ3LXA3 575 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 NCAPG2Q86XI2 1143 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 TMTC2Q8N394 836 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 CHST13Q8NET6 341 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 FBXO40Q9UH90 709 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 MTMR7Q9Y216 660 aa18.58■□□□□ 0.56
UPF3A-208ENST00000484246 CTDP1Q9Y5B0 961 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-208ENST00000484246 DDAH1O94760 285 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 HMGCRP04035 888 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 ICAM1P05362 532 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 PARP1P09874 1014 aaKnown RBP18.57■□□□□ 0.56
UPF3A-208ENST00000484246 FCER1AP12319 257 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 ADORA2AP29274 412 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 GRM4Q14833 912 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 WDR78Q5VTH9 848 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 CHST3Q7LGC8 479 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 SGMS1Q86VZ5 419 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 SH3TC2Q8TF17 1288 aa18.57■□□□□ 0.56
UPF3A-208ENST00000484246 USP26Q9BXU7 913 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms