RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ZNRF3Q9ULT6 936 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 NRDCO43847 1150 aa8.2□□□□□ -1.1
CD46-213ENST00000471987 FANCCQ00597 558 aa8.2□□□□□ -1.1
CD46-213ENST00000471987 CIAPIN1Q6FI81 312 aa8.2□□□□□ -1.1
CD46-213ENST00000471987 CEP128Q6ZU80 1094 aa8.2□□□□□ -1.1
CD46-213ENST00000471987 PRR13Q9NZ81 148 aa8.2□□□□□ -1.1
CD46-213ENST00000471987 OR14I1A6ND48 311 aa8.19□□□□□ -1.1
CD46-213ENST00000471987 AUHQ13825 339 aaKnown RBP8.19□□□□□ -1.1
CD46-213ENST00000471987 TMEM132EQ6IEE7 984 aa8.19□□□□□ -1.1
CD46-213ENST00000471987 LCNL1Q6ZST4 164 aa8.19□□□□□ -1.1
CD46-213ENST00000471987 HHIPL1Q96JK4 782 aa8.19□□□□□ -1.1
CD46-213ENST00000471987 FCRL2Q96LA5 508 aaPredicted RBP8.19□□□□□ -1.1
CD46-213ENST00000471987 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
CD46-213ENST00000471987 CRTAC1Q9NQ79 661 aa8.19□□□□□ -1.1
CD46-213ENST00000471987 GFOD1Q9NXC2 390 aa8.19□□□□□ -1.1
CD46-213ENST00000471987 SUCOQ9UBS9 1254 aaKnown RBP8.19□□□□□ -1.1
CD46-213ENST00000471987 TEX51A0A1B0GUA7 166 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 MYOCOSA0A1B0GUC4 107 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 GALK1P51570 392 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
CD46-213ENST00000471987 LINC00310P59036 64 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 DLG4P78352 724 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 ADGRF1Q5T601 910 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 AMIGO3Q86WK7 504 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 SIRT2Q8IXJ6 389 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 FERD3LQ96RJ6 166 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 TNFRSF10DQ9UBN6 386 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
CD46-213ENST00000471987 BMP8BP34820 402 aa8.17□□□□□ -1.1
CD46-213ENST00000471987 ZNF394Q53GI3 561 aa8.17□□□□□ -1.1
CD46-213ENST00000471987 ZPBP2Q6X784 338 aa8.17□□□□□ -1.1
CD46-213ENST00000471987 TAB3Q8N5C8 712 aaPredicted RBP8.17□□□□□ -1.1
CD46-213ENST00000471987 RNF34Q969K3 372 aa8.17□□□□□ -1.1
CD46-213ENST00000471987 TM9SF2Q99805 663 aa8.17□□□□□ -1.1
CD46-213ENST00000471987 PCDHGB7Q9Y5F8 929 aa8.17□□□□□ -1.1
CD46-213ENST00000471987 MEIS1O00470 390 aa8.16□□□□□ -1.1
CD46-213ENST00000471987 NUAK1O60285 661 aa8.16□□□□□ -1.1
CD46-213ENST00000471987 EFEMP2O95967 443 aa8.16□□□□□ -1.1
CD46-213ENST00000471987 ACRP10323 421 aa8.16□□□□□ -1.1
CD46-213ENST00000471987 RTP1P59025 263 aa8.16□□□□□ -1.1
CD46-213ENST00000471987 CCDC144CPQ8IYA2 1237 aa8.16□□□□□ -1.1
CD46-213ENST00000471987 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
CD46-213ENST00000471987 SMARCC1Q92922 1105 aaPredicted RBP8.16□□□□□ -1.1
CD46-213ENST00000471987 FAM86C2PA6NEL3 165 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 FADS2P1A8MWK0 482 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 HRKO00198 91 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 ZNF205O95201 554 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 PNLIPP16233 465 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 CTSKP43235 329 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 PMS1P54277 932 aaKnown RBP8.15□□□□□ -1.1
CD46-213ENST00000471987 GALNT18Q6P9A2 607 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 CDADC1Q9BWV3 514 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 TAF6LQ9Y6J9 622 aa8.15□□□□□ -1.1
CD46-213ENST00000471987 WTIPA6NIX2 430 aaPredicted RBP8.14□□□□□ -1.11
CD46-213ENST00000471987 C9IYK1 514 aa8.14□□□□□ -1.11
CD46-213ENST00000471987 GSNP06396 782 aa8.14□□□□□ -1.11
CD46-213ENST00000471987 VAV1P15498 845 aa8.14□□□□□ -1.11
CD46-213ENST00000471987 FBXW10Q5XX13 1052 aa8.14□□□□□ -1.11
CD46-213ENST00000471987 RBBP8NLQ8NC74 664 aaPredicted RBP8.14□□□□□ -1.11
CD46-213ENST00000471987 DSCC1Q9BVC3 393 aa8.14□□□□□ -1.11
CD46-213ENST00000471987 ERVK13-1Q9NX77 482 aa8.14□□□□□ -1.11
CD46-213ENST00000471987 DDX41Q9UJV9 622 aaKnown RBP8.14□□□□□ -1.11
CD46-213ENST00000471987 GPR55Q9Y2T6 319 aaPredicted RBP8.14□□□□□ -1.11
CD46-213ENST00000471987 HSF5Q4G112 596 aaPredicted RBP8.13□□□□□ -1.11
CD46-213ENST00000471987 CRTC3Q6UUV7 619 aa8.13□□□□□ -1.11
CD46-213ENST00000471987 PLCD4Q9BRC7 762 aa8.13□□□□□ -1.11
CD46-213ENST00000471987 GCM1Q9NP62 436 aa8.13□□□□□ -1.11
CD46-213ENST00000471987 A0A1W2PQ45 241 aaPredicted RBP8.12□□□□□ -1.11
CD46-213ENST00000471987 A0A1W2PQY0 241 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
CD46-213ENST00000471987 SHOXO15266 292 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 VAMP1P23763 118 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 ARL4AP40617 200 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
CD46-213ENST00000471987 COL9A2Q14055 689 aaPredicted RBP8.12□□□□□ -1.11
CD46-213ENST00000471987 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 LCE4AQ5TA78 99 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 OLFML2BQ68BL8 750 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 CWF19L1Q69YN2 538 aaKnown RBP8.12□□□□□ -1.11
CD46-213ENST00000471987 SGPP1Q9BX95 441 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 IRF2BPLQ9H1B7 796 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 AP5S1Q9NUS5 200 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 SIRT5Q9NXA8 310 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 CNOT6Q9ULM6 557 aaKnown RBP8.12□□□□□ -1.11
CD46-213ENST00000471987 PPT2Q9UMR5 302 aa8.12□□□□□ -1.11
CD46-213ENST00000471987 ABLIM1O14639 778 aa8.11□□□□□ -1.11
CD46-213ENST00000471987 GUCY2CP25092 1073 aa8.11□□□□□ -1.11
CD46-213ENST00000471987 ERVFRD-1P60508 538 aa8.11□□□□□ -1.11
CD46-213ENST00000471987 RACK1P63244 317 aaKnown RBP8.11□□□□□ -1.11
CD46-213ENST00000471987 LAPTM5Q13571 262 aa8.11□□□□□ -1.11
CD46-213ENST00000471987 NOL9Q5SY16 702 aaKnown RBP8.11□□□□□ -1.11
CD46-213ENST00000471987 TDRD10Q5VZ19 366 aaKnown RBP8.11□□□□□ -1.11
CD46-213ENST00000471987 SLCO6A1Q86UG4 719 aa8.11□□□□□ -1.11
CD46-213ENST00000471987 ZNF654Q8IZM8 581 aa8.11□□□□□ -1.11
CD46-213ENST00000471987 SPATA32Q96LK8 384 aa8.11□□□□□ -1.11
CD46-213ENST00000471987 RECKO95980 971 aa8.1□□□□□ -1.11
CD46-213ENST00000471987 MPOP05164 745 aa8.1□□□□□ -1.11
CD46-213ENST00000471987 YBX1P67809 324 aaKnown RBP8.1□□□□□ -1.11
CD46-213ENST00000471987 UNC5AQ6ZN44 842 aa8.1□□□□□ -1.11
CD46-213ENST00000471987 MBD1Q9UIS9 605 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms