RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 FBXO40Q9UH90 709 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 CTAGE9A4FU28 777 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 IQCA1LA6NCM1 817 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 AKR1B15C9JRZ8 316 aaPredicted RBP10.55□□□□□ -0.72
UBE3C-205ENST00000470408 XPOTO43592 962 aaKnown RBP10.55□□□□□ -0.72
UBE3C-205ENST00000470408 LRRC47Q8N1G4 583 aaKnown RBP10.55□□□□□ -0.72
UBE3C-205ENST00000470408 NBPF3Q9H094 633 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 ATP6V0A2Q9Y487 856 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
UBE3C-205ENST00000470408 COPB2P35606 906 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 LIFRP42702 1097 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 NLRP12P59046 1061 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 POSTNQ15063 836 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 ZNF354CQ86Y25 554 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 C2orf69Q8N8R5 385 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 GABPB2Q8TAK5 448 aaPredicted RBP10.55□□□□□ -0.72
UBE3C-205ENST00000470408 AP5M1Q9H0R1 490 aa10.55□□□□□ -0.72
UBE3C-205ENST00000470408 GSPT1P15170 499 aaKnown RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 FOXP1Q9H334 677 aaPredicted RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 MRPL44Q9H9J2 332 aaKnown RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 E9PCH4 1651 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 SYNRGQ9UMZ2 1314 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 RAD17O75943 681 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 ZNF445P59923 1031 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 MICALL1Q8N3F8 863 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 SLC10A4Q96EP9 437 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 METTL14Q9HCE5 456 aaKnown RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 KCNJ14Q9UNX9 436 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 NRXN1Q9ULB1 1477 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 ATP2A2P16615 1042 aaKnown RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 MCM6Q14566 821 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 CD163L1Q9NR16 1453 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 CLRN2A0PK11 232 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 GAS8O95995 478 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 HARSP12081 509 aaKnown RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 RCAN1P53805 252 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 PTH1RQ03431 593 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 PPP2R3AQ06190 1150 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 RAPGEF1Q13905 1077 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 TPH2Q8IWU9 490 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 PLA2G12BQ9BX93 195 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 LSG1Q9H089 658 aaKnown RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 TECPR2O15040 1411 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 ZNF341Q9BYN7 854 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 IFNKQ9P0W0 207 aa10.54□□□□□ -0.72
UBE3C-205ENST00000470408 DDX25Q9UHL0 483 aaKnown RBP10.54□□□□□ -0.72
UBE3C-205ENST00000470408 ABCA6Q8N139 1617 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 ADAMTS13Q76LX8 1427 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 ARHGEF37A1IGU5 675 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 PRAMEF22A3QJZ6 481 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 DDX39AO00148 427 aaKnown RBP10.53□□□□□ -0.72
UBE3C-205ENST00000470408 GRIN3BO60391 1043 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 GCNT3O95395 438 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 KRT5P13647 590 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 ME3Q16798 604 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 CTNND2Q9UQB3 1225 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 RGS12O14924 1447 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 PPRC1Q5VV67 1664 aaKnown RBP10.53□□□□□ -0.72
UBE3C-205ENST00000470408 PTGS1P23219 599 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 PPM1FP49593 454 aaPredicted RBP10.53□□□□□ -0.72
UBE3C-205ENST00000470408 STAT2P52630 851 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 TNNC1P63316 161 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 AOC3Q16853 763 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 SLC9C1Q4G0N8 1177 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 PRR16Q569H4 304 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 MAK16Q9BXY0 300 aaKnown RBP10.53□□□□□ -0.72
UBE3C-205ENST00000470408 ZSWIM4Q9H7M6 989 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 MINPP1Q9UNW1 487 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 BRD1O95696 1058 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 PDIA3P30101 505 aaKnown RBP10.53□□□□□ -0.72
UBE3C-205ENST00000470408 SEL1L2Q5TEA6 688 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 C6orf163Q5TEZ5 329 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 HDXQ7Z353 690 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 CD209Q9NNX6 404 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 MYL1P05976 194 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 CMA1P23946 247 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 HSPA1LP34931 641 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 ASIC2Q16515 512 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 APOA5Q6Q788 366 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 FBXO18Q8NFZ0 1043 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 IMPACTQ9P2X3 320 aa10.53□□□□□ -0.72
UBE3C-205ENST00000470408 DIP2BQ9P265 1576 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 C21orf2O43822 256 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 YARSP54577 528 aaKnown RBP10.52□□□□□ -0.72
UBE3C-205ENST00000470408 HLFQ16534 295 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 XKR9Q5GH70 373 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 ODR4Q5SWX8 454 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 SYDE2Q5VT97 1194 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 CCDC125Q86Z20 511 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 MYOCDQ8IZQ8 938 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 SEC62Q99442 399 aaKnown RBP10.52□□□□□ -0.72
UBE3C-205ENST00000470408 PCDHA4Q9UN74 947 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 GINS2Q9Y248 185 aa10.52□□□□□ -0.72
UBE3C-205ENST00000470408 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
UBE3C-205ENST00000470408 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
UBE3C-205ENST00000470408 PRPF6O94906 941 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms