RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
GPC1-207ENST00000466624 FRMPD2Q68DX3 1309 aaPredicted RBP18.65■□□□□ 0.58
GPC1-207ENST00000466624 SMARCA1P28370 1054 aa18.64■□□□□ 0.57
GPC1-207ENST00000466624 GNAQP50148 359 aa18.64■□□□□ 0.57
GPC1-207ENST00000466624 MICU3Q86XE3 530 aa18.64■□□□□ 0.57
GPC1-207ENST00000466624 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
GPC1-207ENST00000466624 LZTS2Q9BRK4 669 aa18.64■□□□□ 0.57
GPC1-207ENST00000466624 GPCPD1Q9NPB8 672 aa18.64■□□□□ 0.57
GPC1-207ENST00000466624 ISY1Q9ULR0 285 aaKnown RBP18.64■□□□□ 0.57
GPC1-207ENST00000466624 GOLGA8BA8MQT2 603 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 KLRF2D3W0D1 207 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 ST18O60284 1047 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 BCRP11274 1271 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 PDIA3P30101 505 aaKnown RBP18.63■□□□□ 0.57
GPC1-207ENST00000466624 IKQ13123 557 aaPredicted RBP18.63■□□□□ 0.57
GPC1-207ENST00000466624 FAM110CQ1W6H9 321 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 SYDE2Q5VT97 1194 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 C17orf99Q6UX52 265 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 STAG2Q8N3U4 1231 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 ATG4CQ96DT6 458 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 MORF4L1Q9UBU8 362 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 PRR12Q9ULL5 1215 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 HPS5Q9UPZ3 1129 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 RABGAP1Q9Y3P9 1069 aa18.63■□□□□ 0.57
GPC1-207ENST00000466624 CCDC196A0A1B0GTZ2 297 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 GOLGA8AA7E2F4 631 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 VWA5AO00534 786 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
GPC1-207ENST00000466624 RTN1Q16799 776 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 REPS2Q8NFH8 660 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 KIFC2Q96AC6 838 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 CHMP4CQ96CF2 233 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 SLC38A10Q9HBR0 1119 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 RBPJLQ9UBG7 517 aa18.62■□□□□ 0.57
GPC1-207ENST00000466624 MGAMO43451 1857 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 ATP2A1O14983 1001 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 ZBED4O75132 1171 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 TBC1D8O95759 1140 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 RXRAP19793 462 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 SLC16A2P36021 539 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 OAZ1P54368 228 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 POTEEQ6S8J3 1075 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 TMTC3Q6ZXV5 915 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 SPZ1Q9BXG8 430 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
GPC1-207ENST00000466624 RIOX1Q9H6W3 641 aa18.61■□□□□ 0.57
GPC1-207ENST00000466624 CNMDO75829 334 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 CCDC144CPQ8IYA2 1237 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 ADGRF4Q8IZF3 695 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 UBA5Q9GZZ9 404 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 R3HDMLQ9H3Y0 253 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 FAM217BQ9NTX9 383 aaPredicted RBP18.6■□□□□ 0.57
GPC1-207ENST00000466624 CPA4Q9UI42 421 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 PNMA2Q9UL42 364 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 TPCN1Q9ULQ1 816 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 NAP1L2Q9ULW6 460 aaPredicted RBP18.6■□□□□ 0.57
GPC1-207ENST00000466624 PCNTO95613 3336 aa18.6■□□□□ 0.57
GPC1-207ENST00000466624 BAZ2BQ9UIF8 2168 aaKnown RBP18.59■□□□□ 0.57
GPC1-207ENST00000466624 MCM2P49736 904 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 ERVK-24P63145 666 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 RAB11FIP4Q86YS3 637 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 ANKRD13CQ8N6S4 541 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 GPRC5AQ8NFJ5 357 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 MTMR8Q96EF0 704 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
GPC1-207ENST00000466624 TXNRD2Q9NNW7 524 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 BTBD7Q9P203 1132 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 ZNF214Q9UL59 606 aaPredicted RBP18.59■□□□□ 0.57
GPC1-207ENST00000466624 LIMCH1Q9UPQ0 1083 aa18.59■□□□□ 0.57
GPC1-207ENST00000466624 GPR25O00155 361 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 PFKFB2O60825 505 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 PLEKHA8P1O95397 391 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 CDC27P30260 824 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 CCNA1P78396 465 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 TMEM132BQ14DG7 1078 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
GPC1-207ENST00000466624 NBPF11Q86T75 865 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 SRBD1Q8N5C6 995 aaKnown RBP18.58■□□□□ 0.56
GPC1-207ENST00000466624 PAGR1Q9BTK6 254 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 SLKQ9H2G2 1235 aaPredicted RBP18.58■□□□□ 0.56
GPC1-207ENST00000466624 CPVLQ9H3G5 476 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 JMJD4Q9H9V9 463 aa18.58■□□□□ 0.56
GPC1-207ENST00000466624 CTDP1Q9Y5B0 961 aaPredicted RBP18.58■□□□□ 0.56
GPC1-207ENST00000466624 ZNF536O15090 1300 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 CYTH3O43739 400 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 HSPA1AP0DMV8 641 aaKnown RBP18.57■□□□□ 0.56
GPC1-207ENST00000466624 HSPA1BP0DMV9 641 aaKnown RBP18.57■□□□□ 0.56
GPC1-207ENST00000466624 COPB2P35606 906 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 SP3Q02447 781 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 ME3Q16798 604 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 SLC35G1Q2M3R5 365 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 SHCBP1Q8NEM2 672 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 LARP6Q9BRS8 491 aaKnown RBP18.57■□□□□ 0.56
GPC1-207ENST00000466624 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
GPC1-207ENST00000466624 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
GPC1-207ENST00000466624 CNTNAP5Q8WYK1 1306 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms