RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
FN1-214ENST00000460217 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 DGKZQ13574 1117 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 SYDE2Q5VT97 1194 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 TTBK2Q6IQ55 1244 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 TRIM22Q8IYM9 498 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 MTMR8Q96EF0 704 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 SLF1Q9BQI6 1058 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
FN1-214ENST00000460217 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
FN1-214ENST00000460217 CCL15-CCL14A0A0B4J2E2 113 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 PTPDC1A2A3K4 754 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 PRPF3O43395 683 aaKnown RBP12.42□□□□□ -0.42
FN1-214ENST00000460217 FLOT1O75955 427 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 FDX1P10109 184 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 INHBEP58166 350 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
FN1-214ENST00000460217 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
FN1-214ENST00000460217 COG2Q14746 738 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 CCL15Q16663 113 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 TREML2Q5T2D2 321 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 GPAT2Q6NUI2 795 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 GADL1Q6ZQY3 521 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
FN1-214ENST00000460217 BRI3BPQ8WY22 251 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 IPO9Q96P70 1041 aaKnown RBP12.42□□□□□ -0.42
FN1-214ENST00000460217 UBA5Q9GZZ9 404 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
FN1-214ENST00000460217 PPP1R9AQ9ULJ8 1098 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
FN1-214ENST00000460217 ADAMTS5Q9UNA0 930 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 A0A0G2JMZ2 1700 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 SMCHD1A6NHR9 2005 aa12.42□□□□□ -0.42
FN1-214ENST00000460217 COL11A1P12107 1806 aaPredicted RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 JAK2O60674 1132 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 FDPSP14324 419 aaKnown RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 SLC16A2P36021 539 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 NOGQ13253 232 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 DEFB115Q30KQ5 88 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 LBX2Q6XYB7 198 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 ADGRF4Q8IZF3 695 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 CMTR1Q8N1G2 835 aaKnown RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 RGS22Q8NE09 1264 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 PHKBQ93100 1093 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 SLC26A6Q9BXS9 759 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 CPVLQ9H3G5 476 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 FBXO28Q9NVF7 368 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 HOXC10Q9NYD6 342 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 ORC3Q9UBD5 711 aaPredicted RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 SMC3Q9UQE7 1217 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 KIF3AQ9Y496 699 aa12.41□□□□□ -0.42
FN1-214ENST00000460217 V9GY48 417 aaPredicted RBP12.41□□□□□ -0.42
FN1-214ENST00000460217 PNMA6FA0A0J9YX94 578 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 BTBD19C9JJ37 291 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 ZBTB5O15062 677 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 DEXIO95424 95 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 DSG3P32926 999 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 PKN1Q16512 942 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 PFKFB3Q16875 520 aaPredicted RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 FAM177A1Q8N128 213 aaPredicted RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 WASF1Q92558 559 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 ASCC2Q9H1I8 757 aaPredicted RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 RANBP17Q9H2T7 1088 aaKnown RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 CWC22Q9HCG8 908 aaKnown RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 DAXXQ9UER7 740 aaPredicted RBP12.4□□□□□ -0.42
FN1-214ENST00000460217 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
FN1-214ENST00000460217 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
FN1-214ENST00000460217 VWA5AO00534 786 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 SCG2P13521 617 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 OSBPP22059 807 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 GJB2P29033 226 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
FN1-214ENST00000460217 SREBF2Q12772 1141 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 CDC37Q16543 378 aaPredicted RBP12.39□□□□□ -0.43
FN1-214ENST00000460217 CYP4F22Q6NT55 531 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 MB21D1Q8N884 522 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 GTF3C2Q8WUA4 911 aaPredicted RBP12.39□□□□□ -0.43
FN1-214ENST00000460217 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
FN1-214ENST00000460217 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms