RNA–Protein interactions for RNA: ENST00000446276.5

MACF1-208, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-208ENST00000446276 RPAP3Q9H6T3 665 aaPredicted RBP13.69□□□□□ -0.22
MACF1-208ENST00000446276 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
MACF1-208ENST00000446276 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
MACF1-208ENST00000446276 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
MACF1-208ENST00000446276 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
MACF1-208ENST00000446276 CCDC102AQ96A19 550 aa13.69□□□□□ -0.22
MACF1-208ENST00000446276 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
MACF1-208ENST00000446276 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
MACF1-208ENST00000446276 SMC3Q9UQE7 1217 aa13.69□□□□□ -0.22
MACF1-208ENST00000446276 PRPF3O43395 683 aaKnown RBP13.68□□□□□ -0.22
MACF1-208ENST00000446276 FMNL1O95466 1100 aaPredicted RBP13.68□□□□□ -0.22
MACF1-208ENST00000446276 SLC10A3P09131 477 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 CETPP11597 493 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 HOXA7P31268 230 aaPredicted RBP13.68□□□□□ -0.22
MACF1-208ENST00000446276 SLC16A2P36021 539 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
MACF1-208ENST00000446276 TRIM22Q8IYM9 498 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 STK36Q9NRP7 1315 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 PTPRFP10586 1907 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 DTNBO60941 627 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 FDPSP14324 419 aaKnown RBP13.68□□□□□ -0.22
MACF1-208ENST00000446276 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 SYDE2Q5VT97 1194 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 GADL1Q6ZQY3 521 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 CATSPERGQ6ZRH7 1159 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 ADGRF4Q8IZF3 695 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 JMJD4Q9H9V9 463 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
MACF1-208ENST00000446276 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
MACF1-208ENST00000446276 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
MACF1-208ENST00000446276 FAM155AB1AL88 458 aaPredicted RBP13.67□□□□□ -0.22
MACF1-208ENST00000446276 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
MACF1-208ENST00000446276 TREML2Q5T2D2 321 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 PRPF38AQ8NAV1 312 aaKnown RBP13.67□□□□□ -0.22
MACF1-208ENST00000446276 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 TANGO6Q9C0B7 1094 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
MACF1-208ENST00000446276 RASSF10A6NK89 507 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 GJB2P29033 226 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 MKRN3Q13064 507 aaKnown RBP13.67□□□□□ -0.22
MACF1-208ENST00000446276 GPAT2Q6NUI2 795 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 PRR12Q9ULL5 1215 aa13.67□□□□□ -0.22
MACF1-208ENST00000446276 CCL15-CCL14A0A0B4J2E2 113 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 TESPA1A2RU30 521 aaPredicted RBP13.66□□□□□ -0.22
MACF1-208ENST00000446276 FLOT1O75955 427 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 DEXIO95424 95 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
MACF1-208ENST00000446276 CCL15Q16663 113 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 SLF1Q9BQI6 1058 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 CWC22Q9HCG8 908 aaKnown RBP13.66□□□□□ -0.22
MACF1-208ENST00000446276 VAT1LQ9HCJ6 419 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 LOC285556D6RIA3 1793 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 PABPC4Q13310 644 aaKnown RBP eCLIP13.66□□□□□ -0.224e-12■■□□□ 12
MACF1-208ENST00000446276 COG2Q14746 738 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 PKN1Q16512 942 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 KIFC2Q96AC6 838 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
MACF1-208ENST00000446276 KIF3AQ9Y496 699 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
MACF1-208ENST00000446276 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
MACF1-208ENST00000446276 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.22
MACF1-208ENST00000446276 DEFB115Q30KQ5 88 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
MACF1-208ENST00000446276 PIGSQ96S52 555 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 SLC45A1Q9Y2W3 748 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 hCG_1642624A0A1W2PR95 340 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 ZBTB5O15062 677 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 FDX1P10109 184 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 DSG3P32926 999 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
MACF1-208ENST00000446276 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
MACF1-208ENST00000446276 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 WASF1Q92558 559 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
MACF1-208ENST00000446276 ADAMTS5Q9UNA0 930 aa13.65□□□□□ -0.22
MACF1-208ENST00000446276 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
MACF1-208ENST00000446276 INHBEP58166 350 aa13.64□□□□□ -0.23
MACF1-208ENST00000446276 ANKRD23Q86SG2 305 aa13.64□□□□□ -0.23
MACF1-208ENST00000446276 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
MACF1-208ENST00000446276 SEC63Q9UGP8 760 aaKnown RBP13.64□□□□□ -0.23
MACF1-208ENST00000446276 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
MACF1-208ENST00000446276 SCG2P13521 617 aa13.64□□□□□ -0.23
MACF1-208ENST00000446276 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms