RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 PPP2R5BQ15173 497 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 ZSCAN29Q8IWY8 852 aaPredicted RBP13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 ZFPM1Q8IX07 1006 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 SLC44A5Q8NCS7 719 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 BRPF3Q9ULD4 1205 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
AC009404.1-202ENST00000439955 RPTORQ8N122 1335 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 ZBTB43O43298 467 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 TBC1D12O60347 775 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 DDAH1O94760 285 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 CALM1P0DP23 149 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 CALM2P0DP24 149 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 CALM3P0DP25 149 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 SHMT1P34896 483 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 NOVP48745 357 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 SCRN1Q12765 414 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 TRIM32Q13049 653 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 IRF5Q13568 498 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 IFIT1BQ5T764 474 aaKnown RBP13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 NECAB1Q8N987 351 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 ZKSCAN3Q9BRR0 538 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 TRIM34Q9BYJ4 488 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
AC009404.1-202ENST00000439955 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 HMGN5P82970 282 aaKnown RBP13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 STK3Q13188 491 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 NOL9Q5SY16 702 aaKnown RBP13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 ZNF654Q8IZM8 581 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 ANKRD13CQ8N6S4 541 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 SMCR8Q8TEV9 937 aaPredicted RBP13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 MAP3K14Q99558 947 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 KIF3AQ9Y496 699 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 ZHX2Q9Y6X8 837 aa13.66□□□□□ -0.22
AC009404.1-202ENST00000439955 VCANP13611 3396 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 IGKV6D-41A0A0C4DH26 115 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 CCDC196A0A1B0GTZ2 297 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 CXCL11O14625 94 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 CDKL5O76039 1030 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 NUCB2P80303 420 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 MDM2Q00987 491 aaPredicted RBP13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 MAP3K10Q02779 954 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 RCSD1Q6JBY9 416 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 CPLX2Q6PUV4 134 aaKnown RBP13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 COA7Q96BR5 231 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 NAP1L2Q9ULW6 460 aaPredicted RBP13.65□□□□□ -0.22
AC009404.1-202ENST00000439955 A0A0G2JLL6 359 aaPredicted RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 SLURP2P0DP57 97 aa13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 PDCP20941 246 aa13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 CCT2P78371 535 aaKnown RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 FASTKD5Q7L8L6 764 aaKnown RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 PRRT2Q7Z6L0 340 aaPredicted RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 CCDC84Q86UT8 332 aaPredicted RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 MICU3Q86XE3 530 aa13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 NSUN7Q8NE18 718 aaKnown RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 PRDM6Q9NQX0 595 aa13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 RBM28Q9NW13 759 aaKnown RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.64□□□□□ -0.23
AC009404.1-202ENST00000439955 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 CPLX1O14810 134 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 NMT2O60551 498 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 AKR1B1P15121 316 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 CAPN2P17655 700 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 PTPRAP18433 802 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 GJB2P29033 226 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 TROAPQ12815 778 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 RTN1Q16799 776 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 CERKLQ49MI3 558 aaPredicted RBP13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 TMEM179Q6ZVK1 233 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 KAT14Q9H8E8 782 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 HMX1Q9NP08 348 aaPredicted RBP13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
AC009404.1-202ENST00000439955 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 MGAMO43451 1857 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 CTDNEP1O95476 244 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms