RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TSPY2A6NKD2 308 aa17.34■□□□□ 0.37
APP-208ENST00000439274 ORC4O43929 436 aa17.34■□□□□ 0.37
APP-208ENST00000439274 HSPA1LP34931 641 aa17.34■□□□□ 0.37
APP-208ENST00000439274 STAT6P42226 847 aa17.34■□□□□ 0.37
APP-208ENST00000439274 PMS1P54277 932 aaKnown RBP17.34■□□□□ 0.37
APP-208ENST00000439274 JAKMIP3Q5VZ66 844 aa17.34■□□□□ 0.37
APP-208ENST00000439274 RCSD1Q6JBY9 416 aa17.34■□□□□ 0.37
APP-208ENST00000439274 CYP26C1Q6V0L0 522 aa17.34■□□□□ 0.37
APP-208ENST00000439274 IRF2BP1Q8IU81 584 aa17.34■□□□□ 0.37
APP-208ENST00000439274 NAPGQ99747 312 aaPredicted RBP17.34■□□□□ 0.37
APP-208ENST00000439274 ZBTB22O15209 634 aa17.34■□□□□ 0.37
APP-208ENST00000439274 PCP11498 1178 aaKnown RBP17.34■□□□□ 0.37
APP-208ENST00000439274 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
APP-208ENST00000439274 MCM6Q14566 821 aa17.34■□□□□ 0.37
APP-208ENST00000439274 BEND6Q5SZJ8 279 aaPredicted RBP17.34■□□□□ 0.37
APP-208ENST00000439274 WWC2Q6AWC2 1192 aa17.34■□□□□ 0.37
APP-208ENST00000439274 TFR2Q9UP52 801 aa17.34■□□□□ 0.37
APP-208ENST00000439274 LAMB2P55268 1798 aa17.33■□□□□ 0.37
APP-208ENST00000439274 MAP2K7O14733 419 aa17.33■□□□□ 0.36
APP-208ENST00000439274 SPAG1Q07617 926 aa17.33■□□□□ 0.36
APP-208ENST00000439274 TYW1BQ6NUM6 668 aa17.33■□□□□ 0.36
APP-208ENST00000439274 STAG2Q8N3U4 1231 aa17.33■□□□□ 0.36
APP-208ENST00000439274 REXO2Q9Y3B8 237 aaKnown RBP17.33■□□□□ 0.36
APP-208ENST00000439274 PES1O00541 588 aaKnown RBP17.32■□□□□ 0.36
APP-208ENST00000439274 KCNQ4P56696 695 aa17.32■□□□□ 0.36
APP-208ENST00000439274 BLIDQ8IZY5 108 aa17.32■□□□□ 0.36
APP-208ENST00000439274 ANKRD20A12PQ8NF67 263 aa17.32■□□□□ 0.36
APP-208ENST00000439274 CRNKL1Q9BZJ0 848 aaKnown RBP17.32■□□□□ 0.36
APP-208ENST00000439274 ABCB6Q9NP58 842 aa17.32■□□□□ 0.36
APP-208ENST00000439274 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
APP-208ENST00000439274 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
APP-208ENST00000439274 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
APP-208ENST00000439274 USP17L8P0C7I0 530 aa17.32■□□□□ 0.36
APP-208ENST00000439274 NAALADL2Q58DX5 795 aa17.32■□□□□ 0.36
APP-208ENST00000439274 NCAPH2Q6IBW4 605 aa17.32■□□□□ 0.36
APP-208ENST00000439274 FBXO33Q7Z6M2 555 aa17.32■□□□□ 0.36
APP-208ENST00000439274 MSANTD4Q8NCY6 345 aa17.32■□□□□ 0.36
APP-208ENST00000439274 EEF2KMTQ96G04 330 aa17.32■□□□□ 0.36
APP-208ENST00000439274 PDE11AQ9HCR9 933 aa17.32■□□□□ 0.36
APP-208ENST00000439274 CALCOCO1Q9P1Z2 691 aa17.32■□□□□ 0.36
APP-208ENST00000439274 RREB1Q92766 1687 aa17.32■□□□□ 0.36
APP-208ENST00000439274 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
APP-208ENST00000439274 VSNL1P62760 191 aa17.31■□□□□ 0.36
APP-208ENST00000439274 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
APP-208ENST00000439274 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
APP-208ENST00000439274 NOA1Q8NC60 698 aaKnown RBP17.31■□□□□ 0.36
APP-208ENST00000439274 RASSF8Q8NHQ8 419 aa17.31■□□□□ 0.36
APP-208ENST00000439274 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
APP-208ENST00000439274 RMND1Q9NWS8 449 aa17.31■□□□□ 0.36
APP-208ENST00000439274 RAB21Q9UL25 225 aa17.31■□□□□ 0.36
APP-208ENST00000439274 GUCA1BQ9UMX6 200 aa17.31■□□□□ 0.36
APP-208ENST00000439274 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
APP-208ENST00000439274 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
APP-208ENST00000439274 ADSSL1Q8N142 457 aa17.31■□□□□ 0.36
APP-208ENST00000439274 TRERF1Q96PN7 1200 aa17.31■□□□□ 0.36
APP-208ENST00000439274 DISC1Q9NRI5 854 aa17.31■□□□□ 0.36
APP-208ENST00000439274 MCM9Q9NXL9 1143 aa17.3■□□□□ 0.36
APP-208ENST00000439274 EPN1Q9Y6I3 576 aaPredicted RBP17.3■□□□□ 0.36
APP-208ENST00000439274 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
APP-208ENST00000439274 KCNQ2O43526 872 aa17.3■□□□□ 0.36
APP-208ENST00000439274 N4BP1O75113 896 aaKnown RBP17.3■□□□□ 0.36
APP-208ENST00000439274 NDUFA10O95299 355 aa17.3■□□□□ 0.36
APP-208ENST00000439274 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
APP-208ENST00000439274 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
APP-208ENST00000439274 TFAP4Q01664 338 aa17.3■□□□□ 0.36
APP-208ENST00000439274 TRIM14Q14142 442 aa17.3■□□□□ 0.36
APP-208ENST00000439274 ARL6IP4Q66PJ3 421 aaKnown RBP17.3■□□□□ 0.36
APP-208ENST00000439274 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
APP-208ENST00000439274 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
APP-208ENST00000439274 LRRC15Q8TF66 581 aa17.3■□□□□ 0.36
APP-208ENST00000439274 HNRNPLLQ8WVV9 542 aaKnown RBP17.3■□□□□ 0.36
APP-208ENST00000439274 DYNLL2Q96FJ2 89 aa17.3■□□□□ 0.36
APP-208ENST00000439274 PYM1Q9BRP8 204 aaKnown RBP17.3■□□□□ 0.36
APP-208ENST00000439274 KAT14Q9H8E8 782 aa17.3■□□□□ 0.36
APP-208ENST00000439274 IL17RBQ9NRM6 502 aa17.3■□□□□ 0.36
APP-208ENST00000439274 HDAC6Q9UBN7 1215 aa17.3■□□□□ 0.36
APP-208ENST00000439274 PCDHA4Q9UN74 947 aa17.3■□□□□ 0.36
APP-208ENST00000439274 ENC1O14682 589 aa17.29■□□□□ 0.36
APP-208ENST00000439274 USP5P45974 858 aa17.29■□□□□ 0.36
APP-208ENST00000439274 AMPD2Q01433 879 aa17.29■□□□□ 0.36
APP-208ENST00000439274 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
APP-208ENST00000439274 MB21D1Q8N884 522 aa17.29■□□□□ 0.36
APP-208ENST00000439274 USP21Q9UK80 565 aa17.29■□□□□ 0.36
APP-208ENST00000439274 MYO6Q9UM54 1294 aa17.29■□□□□ 0.36
APP-208ENST00000439274 H7C1D1 291 aa17.29■□□□□ 0.36
APP-208ENST00000439274 CALML3P27482 149 aa17.29■□□□□ 0.36
APP-208ENST00000439274 KIF5BP33176 963 aa17.29■□□□□ 0.36
APP-208ENST00000439274 WHAMMP3Q1A5X7 153 aa17.29■□□□□ 0.36
APP-208ENST00000439274 INF2Q27J81 1249 aa17.29■□□□□ 0.36
APP-208ENST00000439274 DTHD1Q6ZMT9 781 aa17.29■□□□□ 0.36
APP-208ENST00000439274 TXNRD3Q86VQ6 643 aa17.29■□□□□ 0.36
APP-208ENST00000439274 PNMA1Q8ND90 353 aa17.29■□□□□ 0.36
APP-208ENST00000439274 ATP8A2Q9NTI2 1148 aa17.29■□□□□ 0.36
APP-208ENST00000439274 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
APP-208ENST00000439274 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
APP-208ENST00000439274 ADAM21Q9UKJ8 722 aa17.29■□□□□ 0.36
APP-208ENST00000439274 HIBADHP31937 336 aaKnown RBP17.28■□□□□ 0.36
APP-208ENST00000439274 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
APP-208ENST00000439274 L1RE1Q9UN81 338 aa17.28■□□□□ 0.36
APP-208ENST00000439274 CCDC194A0A1B0GVG4 234 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms