RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TMTC3Q6ZXV5 915 aa10.78□□□□□ -0.68
CUX1-206ENST00000437600 ZNF444Q8N0Y2 327 aaPredicted RBP10.78□□□□□ -0.68
CUX1-206ENST00000437600 STK36Q9NRP7 1315 aa10.78□□□□□ -0.68
CUX1-206ENST00000437600 ECE2O60344 883 aa10.77□□□□□ -0.68
CUX1-206ENST00000437600 RAD17O75943 681 aa10.77□□□□□ -0.68
CUX1-206ENST00000437600 TOP1P11387 765 aaKnown RBP10.77□□□□□ -0.68
CUX1-206ENST00000437600 XBP1P17861 261 aa10.77□□□□□ -0.68
CUX1-206ENST00000437600 RBM5P52756 815 aaKnown RBP eCLIP10.77□□□□□ -0.684e-7■■■□□ 19.1
CUX1-206ENST00000437600 RASSF7Q02833 373 aa10.77□□□□□ -0.68
CUX1-206ENST00000437600 NCBP1Q09161 790 aaKnown RBP10.77□□□□□ -0.68
CUX1-206ENST00000437600 TCP10Q12799 353 aa10.77□□□□□ -0.68
CUX1-206ENST00000437600 DDX4Q9NQI0 724 aaKnown RBP10.77□□□□□ -0.68
CUX1-206ENST00000437600 BRCA1P38398 1863 aaKnown RBP10.77□□□□□ -0.69
CUX1-206ENST00000437600 TIAM2Q8IVF5 1701 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 GPR75-ASB3A0A0A6YYF3 556 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 A0A0U1RQJ8 604 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 DHX8Q14562 1220 aaKnown RBP10.77□□□□□ -0.69
CUX1-206ENST00000437600 SLC35G1Q2M3R5 365 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
CUX1-206ENST00000437600 TTC38Q5R3I4 469 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 UTP14CQ5TAP6 766 aaKnown RBP10.77□□□□□ -0.69
CUX1-206ENST00000437600 PNMA1Q8ND90 353 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 ATRIPQ8WXE1 791 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 DESI2Q9BSY9 194 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 KAT14Q9H8E8 782 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 FAM205AQ6ZU69 1335 aa10.77□□□□□ -0.69
CUX1-206ENST00000437600 YDJCA8MPS7 323 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 ORC4O43929 436 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 FGRP09769 529 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 NFIAQ12857 509 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 MTF1Q14872 753 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 SBK1Q52WX2 424 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 USP17L2Q6R6M4 530 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 C15orf52Q6ZUT6 534 aaKnown RBP10.76□□□□□ -0.69
CUX1-206ENST00000437600 AMOTL1Q8IY63 956 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 PDCL2Q8N4E4 241 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 PAGE5Q96GU1 130 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 PPP1R13BQ96KQ4 1090 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 IRX2Q9BZI1 471 aaPredicted RBP10.76□□□□□ -0.69
CUX1-206ENST00000437600 UBA5Q9GZZ9 404 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 OSBPL5Q9H0X9 879 aaPredicted RBP10.76□□□□□ -0.69
CUX1-206ENST00000437600 SPON1Q9HCB6 807 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 CYTH3O43739 400 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 SCG2P13521 617 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 RASA1P20936 1047 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 GTF2F1P35269 517 aaKnown RBP eCLIP10.76□□□□□ -0.692e-8■■■□□ 18.7
CUX1-206ENST00000437600 CDK8P49336 464 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 DPYDQ12882 1025 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 NYAP1Q6ZVC0 841 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 TMC4Q7Z404 712 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 HEATR3Q7Z4Q2 680 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 EPC1Q9H2F5 836 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 DNAI1Q9UI46 699 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
CUX1-206ENST00000437600 IKBKBO14920 756 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 RAD21O60216 631 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 PPP4CP60510 307 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 CUL4BQ13620 913 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 KARSQ15046 597 aaKnown RBP10.76□□□□□ -0.69
CUX1-206ENST00000437600 INF2Q27J81 1249 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 CCDC93Q567U6 631 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 LARGE2Q8N3Y3 721 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 EYA3Q99504 573 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 MTRQ99707 1265 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 BPIFA3Q9BQP9 254 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 COA1Q9GZY4 146 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 SCAF8Q9UPN6 1271 aaKnown RBP10.76□□□□□ -0.69
CUX1-206ENST00000437600 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 CNTNAP5Q8WYK1 1306 aa10.76□□□□□ -0.69
CUX1-206ENST00000437600 FANCGO15287 622 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 CCT6AP40227 531 aaKnown RBP10.75□□□□□ -0.69
CUX1-206ENST00000437600 SHROOM1Q2M3G4 852 aaPredicted RBP10.75□□□□□ -0.69
CUX1-206ENST00000437600 ZFPM1Q8IX07 1006 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 USP40Q9NVE5 1235 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 ERCC3P19447 782 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 SARSP49591 514 aaKnown RBP10.75□□□□□ -0.69
CUX1-206ENST00000437600 PRELPP51888 382 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 GSDMDP57764 484 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 ATP2B2Q01814 1243 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 RASSF8Q8NHQ8 419 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 SNED1Q8TER0 1413 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 TBC1D22AQ8WUA7 517 aa10.75□□□□□ -0.69
CUX1-206ENST00000437600 FAM237AA0A1B0GTK4 181 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 TGFB2P61812 414 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 MORC3Q14149 939 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 CEP95Q96GE4 821 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 TMEM47Q9BQJ4 181 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 TMEM60Q9H2L4 133 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 NFKBIEO00221 500 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 ELF2Q15723 593 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 ERCC6LQ2NKX8 1250 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 GPIHBP1Q8IV16 184 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 VSTM4Q8IW00 320 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
CUX1-206ENST00000437600 CEP131Q9UPN4 1083 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 SHTN1A0MZ66 631 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 PES1O00541 588 aaKnown RBP10.74□□□□□ -0.69
CUX1-206ENST00000437600 CTIFO43310 598 aaKnown RBP10.74□□□□□ -0.69
CUX1-206ENST00000437600 TOGARAM2Q6ZUX3 1019 aa10.74□□□□□ -0.69
CUX1-206ENST00000437600 CNPY4Q8N129 248 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms