RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 SMC5Q8IY18 1101 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 CCDC89Q8N998 374 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SPATA5Q8NB90 893 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 TTC14Q96N46 770 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 NEK1Q96PY6 1258 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 MMP19Q99542 508 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SLF1Q9BQI6 1058 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 UPF3BQ9BZI7 483 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 NUB1Q9Y5A7 615 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SPATA31A1Q5TZJ5 1347 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SYNGAP1Q96PV0 1343 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 CAPN8A6NHC0 703 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SFI1A8K8P3 1242 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 GOLGA8MH3BSY2 632 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 C21orf2O43822 256 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 OPA1O60313 960 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 LDHAP00338 332 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SFNP31947 248 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 PHKA2P46019 1235 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 KPNA2P52292 529 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 PRPSAP1Q14558 356 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 NAA30Q147X3 362 aaPredicted RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 TAF11Q15544 211 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 EZH2Q15910 746 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 ARHGEF25Q86VW2 580 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 TMEM199Q8N511 208 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 BBOF1Q8ND07 529 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 DPF3Q92784 378 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 KIAA1586Q9HCI6 787 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SLC38A7Q9NVC3 462 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 THG1LQ9NWX6 298 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 DDX49Q9Y6V7 483 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 GOLGA8QA0A0J9YX86 632 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 PSDA5PKW4 1024 aaPredicted RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 GOLGA8OA6NCC3 632 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 GOLGA8NF8WBI6 632 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 NCK2O43639 380 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 MYBL2P10244 700 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 STAT6P42226 847 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 MTIF2P46199 727 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 MAP2K5Q13163 448 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 LAMB3Q13751 1172 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 BTBD8Q5XKL5 378 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 FBXO11Q86XK2 927 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 NLRP7Q8WX94 980 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 APPBP2Q92624 585 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 FAM169AQ9Y6X4 670 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 COL15A1P39059 1388 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 FRMD3A2A2Y4 597 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 DISP2A7MBM2 1401 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 MED7O43513 233 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 P4HBP07237 508 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SRGAP2CP0DJJ0 459 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 ALDH1A3P47895 512 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 HUNKP57058 714 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SEPT2Q15019 361 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 STXBP2Q15833 593 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 KIAA1328Q86T90 577 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 DCP1BQ8IZD4 617 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 OTUD6BQ8N6M0 293 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 ANKRD36BP1Q96IX9 119 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 ZNF560Q96MR9 790 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 RUNDC3BQ96NL0 473 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 ORAI2Q96SN7 254 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 CDK5RAP1Q96SZ6 601 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 MED10Q9BTT4 135 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SELENOOQ9BVL4 669 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 EMILIN2Q9BXX0 1053 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 VPS37BQ9H9H4 285 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 GBA2Q9HCG7 927 aaPredicted RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SAGE1Q9NXZ1 904 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 DNM3Q9UQ16 869 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 MRPS17Q9Y2R5 130 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 ABCA9Q8IUA7 1624 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 C1orf167Q5SNV9 1468 aa2.33□□□□□ -2.04
SCN7A-201ENST00000409855 SPTBN5Q9NRC6 3674 aaKnown RBP2.33□□□□□ -2.04
SCN7A-201ENST00000409855 DENND3A2RUS2 1198 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 ZWINTO95229 277 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 ATP2B1P20020 1258 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 BTDP43251 543 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 GTF2IP78347 998 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 LGSNQ5TDP6 509 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 LUZP1Q86V48 1076 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 SLC7A3Q8WY07 619 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 CDCA7LQ96GN5 454 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 EYA1Q99502 592 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 TSGA10Q9BZW7 698 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 TBC1D22BQ9NU19 505 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 CHPF2Q9P2E5 772 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 MTUS1Q9ULD2 1270 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 USP16Q9Y5T5 823 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 MRFAP1Q9Y605 127 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 PI4KAP2A4QPH2 592 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 MYCLP12524 364 aaPredicted RBP2.32□□□□□ -2.04
SCN7A-201ENST00000409855 PAFAH1B1P43034 410 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 ZAP70P43403 619 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 RCAN1P53805 252 aa2.32□□□□□ -2.04
SCN7A-201ENST00000409855 CKAP4Q07065 602 aaKnown RBP2.32□□□□□ -2.04
SCN7A-201ENST00000409855 WASHC5Q12768 1159 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms