RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 PLCG2P16885 1265 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 ZNF18P17022 549 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 CALML3P27482 149 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 STX17P56962 302 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 PDXDC2PQ6P474 469 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 VAT1LQ9HCJ6 419 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 IMPACTQ9P2X3 320 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 SCN9AQ15858 1988 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 NEMFO60524 1076 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 TRAPPC10P48553 1259 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 GSDMDP57764 484 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 DPP8Q6V1X1 898 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 MLKLQ8NB16 471 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 DBNDD1Q9H9R9 158 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 SH3GLB2Q9NR46 395 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 E4F1Q66K89 784 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 PIGSQ96S52 555 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 FEZ1Q99689 392 aa17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-202ENST00000409472 CCDC194A0A1B0GVG4 234 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 PARP1P09874 1014 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 NPR1P16066 1061 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 SFPQP23246 707 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 GNAQP50148 359 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 GABPAQ06546 454 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 NFIAQ12857 509 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 CUL4BQ13620 913 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 KARSQ15046 597 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 KANK3Q6NY19 840 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 ZNF771Q7L3S4 317 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 VSTM4Q8IW00 320 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 CACNB3P54284 484 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 SHROOM1Q2M3G4 852 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
SCAMP4-202ENST00000409472 NAPAP54920 295 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 NYAP1Q6ZVC0 841 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 ZFPM1Q8IX07 1006 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 CCDC150Q8NCX0 1101 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 ENOX1Q8TC92 643 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 SPZ1Q9BXG8 430 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 ZNF287Q9HBT7 754 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 DAGLBQ8NCG7 672 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 PLIN2Q99541 437 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 USP40Q9NVE5 1235 aa17.22■□□□□ 0.35
SCAMP4-202ENST00000409472 SIPA1L1O43166 1804 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 FAM196BA6NMK8 535 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 PDHBP11177 359 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 NOVP48745 357 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 CDC42EP5Q6NZY7 148 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 TMC4Q7Z404 712 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 CCDC148Q8NFR7 591 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 ZNF622Q969S3 477 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 SLX4Q8IY92 1834 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.35
SCAMP4-202ENST00000409472 PPP1R3GB7ZBB8 358 aa17.21■□□□□ 0.34
SCAMP4-202ENST00000409472 NAALADL2Q58DX5 795 aa17.21■□□□□ 0.34
SCAMP4-202ENST00000409472 APOBEC3HQ6NTF7 200 aaKnown RBP17.21■□□□□ 0.34
SCAMP4-202ENST00000409472 TMEM260Q9NX78 707 aa17.21■□□□□ 0.34
SCAMP4-202ENST00000409472 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.34
SCAMP4-202ENST00000409472 PLIN4Q96Q06 1357 aa17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 ZNF646O15015 1829 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 NT5C2P49902 561 aa17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 GABPB1Q06547 395 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 ZMYND12Q9H0C1 365 aa17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 VGLL3A8MV65 326 aa17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 SHMT1P34896 483 aa17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 IQUBQ8NA54 791 aa17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 CTNND2Q9UQB3 1225 aa17.2■□□□□ 0.34
SCAMP4-202ENST00000409472 IGKV6D-41A0A0C4DH26 115 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 CCDC66A2RUB6 948 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 SMCO2A6NFE2 343 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 PLSCR1O15162 318 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 CBFA2T2O43439 604 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 SLC20A2Q08357 652 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 CEP135Q66GS9 1140 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 PPP1R13BQ96KQ4 1090 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 DNAJC18Q9H819 358 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 DACH1Q9UI36 760 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 PARP3Q9Y6F1 533 aa17.19■□□□□ 0.34
SCAMP4-202ENST00000409472 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 TEX33O43247 280 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 CHRNA5P30532 468 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 KIAA0825Q8IV33 1275 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 COA7Q96BR5 231 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 RRP36Q96EU6 259 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 MASTLQ96GX5 879 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms