RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 GJA5P36382 358 aa23.68■■□□□ 1.38
CHKB-201ENST00000406938 PFKFB3Q16875 520 aaPredicted RBP23.68■■□□□ 1.38
CHKB-201ENST00000406938 SYDE2Q5VT97 1194 aa23.68■■□□□ 1.38
CHKB-201ENST00000406938 C8orf76Q96K31 380 aa23.68■■□□□ 1.38
CHKB-201ENST00000406938 RPAP3Q9H6T3 665 aaPredicted RBP23.68■■□□□ 1.38
CHKB-201ENST00000406938 GJB4Q9NTQ9 266 aa23.68■■□□□ 1.38
CHKB-201ENST00000406938 SEC63Q9UGP8 760 aaKnown RBP23.68■■□□□ 1.38
CHKB-201ENST00000406938 KCNH4Q9UQ05 1017 aa23.68■■□□□ 1.38
CHKB-201ENST00000406938 VPS37CA5D8V6 355 aaPredicted RBP23.67■■□□□ 1.38
CHKB-201ENST00000406938 NUCB2P80303 420 aa23.67■■□□□ 1.38
CHKB-201ENST00000406938 TANGO6Q9C0B7 1094 aa23.67■■□□□ 1.38
CHKB-201ENST00000406938 FEM1BQ9UK73 627 aa23.67■■□□□ 1.38
CHKB-201ENST00000406938 PTPRFP10586 1907 aa23.67■■□□□ 1.38
CHKB-201ENST00000406938 BAZ2BQ9UIF8 2168 aaKnown RBP23.67■■□□□ 1.38
CHKB-201ENST00000406938 A0A0G2JLL6 359 aaPredicted RBP23.66■■□□□ 1.38
CHKB-201ENST00000406938 H3BQV1 296 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 CXCL11O14625 94 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 HUNKP57058 714 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 IFFO2Q5TF58 517 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 PRRT2Q7Z6L0 340 aaPredicted RBP23.66■■□□□ 1.38
CHKB-201ENST00000406938 FBXO28Q9NVF7 368 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 MTMR6Q9Y217 621 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 MYH6P13533 1939 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 PLA2G6O60733 806 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 BRD1O95696 1058 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 GUCY1B3Q02153 619 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 OTUD7BQ6GQQ9 843 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 FAM160B2Q86V87 743 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 CHURC1Q8WUH1 139 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 MTMR8Q96EF0 704 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 PRR12Q9ULL5 1215 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 ZDHHC9Q9Y397 364 aa23.66■■□□□ 1.38
CHKB-201ENST00000406938 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
CHKB-201ENST00000406938 LOC285556D6RIA3 1793 aa23.65■■□□□ 1.38
CHKB-201ENST00000406938 FBXO18Q8NFZ0 1043 aa23.65■■□□□ 1.38
CHKB-201ENST00000406938 GPKOWQ92917 476 aaPredicted RBP eCLIP23.65■■□□□ 1.38
CHKB-201ENST00000406938 KIFC2Q96AC6 838 aa23.65■■□□□ 1.38
CHKB-201ENST00000406938 WNK4Q96J92 1243 aa23.65■■□□□ 1.38
CHKB-201ENST00000406938 VPS54Q9P1Q0 977 aa23.65■■□□□ 1.38
CHKB-201ENST00000406938 ZBTB5O15062 677 aa23.64■■□□□ 1.38
CHKB-201ENST00000406938 PDIA4P13667 645 aaKnown RBP23.64■■□□□ 1.38
CHKB-201ENST00000406938 TRIM29Q14134 588 aa23.64■■□□□ 1.38
CHKB-201ENST00000406938 CDC37Q16543 378 aaPredicted RBP23.64■■□□□ 1.38
CHKB-201ENST00000406938 FOXD4L5Q5VV16 416 aaPredicted RBP23.64■■□□□ 1.38
CHKB-201ENST00000406938 WWC2Q6AWC2 1192 aa23.64■■□□□ 1.38
CHKB-201ENST00000406938 HEATR3Q7Z4Q2 680 aa23.64■■□□□ 1.38
CHKB-201ENST00000406938 FOXD4L4Q8WXT5 416 aaPredicted RBP23.64■■□□□ 1.38
CHKB-201ENST00000406938 SHISA4Q96DD7 197 aa23.64■■□□□ 1.38
CHKB-201ENST00000406938 SLF1Q9BQI6 1058 aa23.64■■□□□ 1.38
CHKB-201ENST00000406938 PNMA6FA0A0J9YX94 578 aa23.63■■□□□ 1.37
CHKB-201ENST00000406938 FLOT1O75955 427 aa23.63■■□□□ 1.37
CHKB-201ENST00000406938 KRT40Q6A162 431 aa23.63■■□□□ 1.37
CHKB-201ENST00000406938 SAMD1Q6SPF0 538 aaPredicted RBP23.63■■□□□ 1.37
CHKB-201ENST00000406938 GADL1Q6ZQY3 521 aa23.63■■□□□ 1.37
CHKB-201ENST00000406938 SAPCD2Q86UD0 394 aa23.63■■□□□ 1.37
CHKB-201ENST00000406938 PROCA1Q8NCQ7 364 aaPredicted RBP23.63■■□□□ 1.37
CHKB-201ENST00000406938 ZSCAN22P10073 491 aaPredicted RBP23.62■■□□□ 1.37
CHKB-201ENST00000406938 XBP1P17861 261 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 SNAP25P60880 206 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 QRICH1Q2TAL8 776 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 TREML2Q5T2D2 321 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 PPP1R11O60927 126 aaPredicted RBP23.62■■□□□ 1.37
CHKB-201ENST00000406938 FSTL1Q12841 308 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 SNAPC2Q13487 334 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 RGS22Q8NE09 1264 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 BARHL2Q9NY43 387 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 KCNJ14Q9UNX9 436 aa23.62■■□□□ 1.37
CHKB-201ENST00000406938 STXBP3O00186 592 aa23.61■■□□□ 1.37
CHKB-201ENST00000406938 MKRN3Q13064 507 aaKnown RBP23.61■■□□□ 1.37
CHKB-201ENST00000406938 TYW1BQ6NUM6 668 aa23.61■■□□□ 1.37
CHKB-201ENST00000406938 PRPF38AQ8NAV1 312 aaKnown RBP23.61■■□□□ 1.37
CHKB-201ENST00000406938 RANBP17Q9H2T7 1088 aaKnown RBP23.61■■□□□ 1.37
CHKB-201ENST00000406938 PPP1R9AQ9ULJ8 1098 aa23.61■■□□□ 1.37
CHKB-201ENST00000406938 USP17L15C9J2P7 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L13C9JLJ4 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L11C9JVI0 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L18D6R9N7 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L22D6RA61 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L17D6RBQ6 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L19D6RCP7 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L20D6RJB6 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 hCG_1984214I3L0E3 225 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 ZBTB48P10074 688 aaPredicted RBP23.6■■□□□ 1.37
CHKB-201ENST00000406938 USP17L24Q0WX57 530 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 MOGSQ13724 837 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 SPRYD7Q5W111 196 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 CATSPERGQ6ZRH7 1159 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 ZNF713Q8N859 430 aaPredicted RBP23.6■■□□□ 1.37
CHKB-201ENST00000406938 SH3GLB2Q9NR46 395 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 TLL2Q9Y6L7 1015 aa23.6■■□□□ 1.37
CHKB-201ENST00000406938 F13A1P00488 732 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 MMP1P03956 469 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 FERMT3Q86UX7 667 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 PHF20Q9BVI0 1012 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 PARP14Q460N5 1801 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 NAPAP54920 295 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 MCTP1Q6DN14 999 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 FASTKD5Q7L8L6 764 aaKnown RBP23.59■■□□□ 1.37
CHKB-201ENST00000406938 RASAL3Q86YV0 1011 aa23.59■■□□□ 1.37
CHKB-201ENST00000406938 CCDC148Q8NFR7 591 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms