RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 TSTA3Q13630 321 aaPredicted RBP8.74□□□□□ -1.01
TRPS1-203ENST00000395715 TRIM58Q8NG06 486 aa8.74□□□□□ -1.01
TRPS1-203ENST00000395715 EFCAB8A8MWE9 144 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 E2F6O75461 281 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 TNNC2P02585 160 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 KRT81Q14533 505 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 CAPRIN2Q6IMN6 1127 aaKnown RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 NOSTRINQ8IVI9 506 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 PPHLN1Q8NEY8 458 aaKnown RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 SNX29Q8TEQ0 813 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 TSC1Q92574 1164 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 IFIH1Q9BYX4 1025 aaKnown RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 ZNF277Q9NRM2 450 aaPredicted RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 TBC1D23Q9NUY8 699 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 IFNB1P01574 187 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 IFNA8P32881 189 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 S100A5P33763 92 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 APBA1Q02410 837 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 HDAC1Q13547 482 aaPredicted RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 LONRF3Q496Y0 759 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 ICA1LQ8NDH6 482 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 KIF9Q9HAQ2 790 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 NCF2P19878 526 aaPredicted RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 FBXW4P57775 412 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 LZICQ8WZA0 190 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 MYD88Q99836 296 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 MYO1AQ9UBC5 1043 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 TTI1O43156 1089 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 ARHGEF18Q6ZSZ5 1173 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 CNNM2Q9H8M5 875 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 ESRRAP11474 423 aaPredicted RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 PDCLQ13371 301 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 MCUQ8NE86 351 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 TRPV6Q9H1D0 765 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 RASSF10A6NK89 507 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 TRIM71Q2Q1W2 868 aaKnown RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 MMS22LQ6ZRQ5 1243 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 PATL1Q86TB9 770 aaKnown RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 SIKE1Q9BRV8 207 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 COPB1P53618 953 aaKnown RBP8.73□□□□□ -1.01
TRPS1-203ENST00000395715 NCAPG2Q86XI2 1143 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 CATSPER3Q86XQ3 398 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 SPATA17Q96L03 361 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 C10orf88Q9H8K7 445 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 MIS18AQ9NYP9 233 aa8.73□□□□□ -1.01
TRPS1-203ENST00000395715 KRT17Q04695 432 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 CCDC144BQ3MJ40 725 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 SPDYE1Q8NFV5 336 aaPredicted RBP8.72□□□□□ -1.01
TRPS1-203ENST00000395715 POC1B-GALNT4F8VUJ3 575 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 GNAQP50148 359 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 DMPKQ09013 629 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 OLFML2BQ68BL8 750 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 HIBCHQ6NVY1 386 aaPredicted RBP8.72□□□□□ -1.01
TRPS1-203ENST00000395715 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRPS1-203ENST00000395715 MAGEA9P43362 315 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 ATAD3BQ5T9A4 648 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 SLC44A4Q53GD3 710 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 KAZNQ674X7 775 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.72□□□□□ -1.01
TRPS1-203ENST00000395715 ANKRD30BQ9BXX2 1392 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 KRT87PA6NCN2 255 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 KCNK3O14649 394 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 CFLARO15519 480 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 TSC22D1Q15714 1073 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 Q6ZUG5 572 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 B4GALNT2Q8NHY0 566 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 RRAGDQ9NQL2 400 aaPredicted RBP8.72□□□□□ -1.01
TRPS1-203ENST00000395715 THAP11Q96EK4 314 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 TMEM245Q9H330 911 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 ARHGEF3Q9NR81 526 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 ANGPTL8Q6UXH0 198 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 PNMA2Q9UL42 364 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 ADCY3O60266 1144 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 RPN1P04843 607 aaKnown RBP8.72□□□□□ -1.01
TRPS1-203ENST00000395715 CCDC149Q6ZUS6 474 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
TRPS1-203ENST00000395715 BICC1Q9H694 974 aaKnown RBP8.72□□□□□ -1.01
TRPS1-203ENST00000395715 TMEM247A6NEH6 219 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 MAPK13O15264 365 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 OATP04181 439 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 SCG2P13521 617 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 AP2B1P63010 937 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 NFE2L2Q16236 605 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 ACRBPQ8NEB7 543 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 TRMT112Q9UI30 125 aaKnown RBP8.71□□□□□ -1.01
TRPS1-203ENST00000395715 ATF2P15336 505 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 SERPINB1P30740 379 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 MYLK4Q86YV6 388 aaPredicted RBP8.71□□□□□ -1.01
TRPS1-203ENST00000395715 ST13P5Q8NFI4 369 aaPredicted RBP8.71□□□□□ -1.01
TRPS1-203ENST00000395715 RUNDC3BQ96NL0 473 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 G3BP2Q9UN86 482 aaKnown RBP8.71□□□□□ -1.01
TRPS1-203ENST00000395715 FIS1Q9Y3D6 152 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 RTEL1-TNFRSF6BF6WH68 1400 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 ITKQ08881 620 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 KLHL30Q0D2K2 578 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 TRIM50Q86XT4 487 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 BRF1Q92994 677 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 PLIN2Q99541 437 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 CABP1Q9NZU7 370 aa8.71□□□□□ -1.01
TRPS1-203ENST00000395715 GNAT3A8MTJ3 354 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms