RNA–Protein interactions for RNA: ENST00000394884.7

CDC23-201, Transcript of cell division cycle 23, humanhuman

TSL 1 (best) BASIC

Gene CDC23, Length 1,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-201ENST00000394884 ERVK-9P63128 1117 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 ERVK-24P63145 666 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 WDR78Q5VTH9 848 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 CDC42EP5Q6NZY7 148 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 OTOP2Q7RTS6 562 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 UBE3BQ7Z3V4 1068 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 TMEM199Q8N511 208 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 HPS1Q92902 700 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 CCDC136Q96JN2 1154 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 PRRX2Q99811 253 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 MRIQ9BWK5 157 aa12.66□□□□□ -0.38
CDC23-201ENST00000394884 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDC23-201ENST00000394884 RALYQ9UKM9 306 aaKnown RBP12.66□□□□□ -0.38
CDC23-201ENST00000394884 GAKO14976 1311 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 RLFQ13129 1914 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 FGBP02675 491 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 IGKV5-2P06315 115 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 CTHP32929 405 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
CDC23-201ENST00000394884 HERVK_113P62684 666 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 TUSC1Q2TAM9 212 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 LEXMQ3ZCV2 418 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 LINC01559Q495D7 138 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 FAM47AQ5JRC9 791 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 ARNTL2Q8WYA1 636 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 BAP1Q92560 729 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 PPP1R12CQ9BZL4 782 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 MTIF3Q9H2K0 278 aaKnown RBP12.65□□□□□ -0.38
CDC23-201ENST00000394884 UBE2ZQ9H832 354 aaPredicted RBP12.65□□□□□ -0.38
CDC23-201ENST00000394884 TBX21Q9UL17 535 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
CDC23-201ENST00000394884 PCDHA11Q9Y5I1 949 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.38
CDC23-201ENST00000394884 C5orf42Q9H799 3197 aa12.65□□□□□ -0.39
CDC23-201ENST00000394884 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 A0A1W2PQ45 241 aaPredicted RBP12.64□□□□□ -0.39
CDC23-201ENST00000394884 A0A1W2PQY0 241 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 SEPT4O43236 478 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 SIAH2O43255 324 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 FRAT2O75474 233 aaPredicted RBP12.64□□□□□ -0.39
CDC23-201ENST00000394884 KCNA5P22460 613 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 PRAMEF19Q5SWL8 479 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 TOX2Q96NM4 488 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
CDC23-201ENST00000394884 GMPR2Q9P2T1 348 aaKnown RBP12.64□□□□□ -0.39
CDC23-201ENST00000394884 CA3P07451 260 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 GRB10Q13322 594 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
CDC23-201ENST00000394884 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
CDC23-201ENST00000394884 ZNF511Q8NB15 262 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 IL23AQ9NPF7 189 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 USP40Q9NVE5 1235 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 LIMD1Q9UGP4 676 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 MAP3K2Q9Y2U5 619 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 SPTBN4Q9H254 2564 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 CHD7Q9P2D1 2997 aa12.63□□□□□ -0.39
CDC23-201ENST00000394884 SLC15A5A6NIM6 579 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 H7C1W4 665 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 GLRX3O76003 335 aaKnown RBP12.62□□□□□ -0.39
CDC23-201ENST00000394884 CSF1RP07333 972 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 SH3BP5LQ7L8J4 393 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 PBXIP1Q96AQ6 731 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 MYO9BQ13459 2157 aa12.62□□□□□ -0.39
CDC23-201ENST00000394884 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.61□□□□□ -0.39
CDC23-201ENST00000394884 PRR23AA6NEV1 266 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 H0Y858 1186 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 PGK1P00558 417 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 RIPK4P57078 832 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 TMEM67Q5HYA8 995 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 DGLUCYQ7Z3D6 616 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 VPS37DQ86XT2 251 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
CDC23-201ENST00000394884 ATP13A2Q9NQ11 1180 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 TLR9Q9NR96 1032 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 MUTYHQ9UIF7 546 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 A0A0G2JMZ2 1700 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 PRRC2BQ5JSZ5 2229 aaKnown RBP12.61□□□□□ -0.39
CDC23-201ENST00000394884 MAST3O60307 1309 aa12.61□□□□□ -0.39
CDC23-201ENST00000394884 KMT2BQ9UMN6 2715 aaPredicted RBP12.61□□□□□ -0.39
CDC23-201ENST00000394884 ZBBXA8MT70 800 aa12.6□□□□□ -0.39
CDC23-201ENST00000394884 HOXC6P09630 235 aa12.6□□□□□ -0.39
CDC23-201ENST00000394884 VARSP26640 1264 aaKnown RBP12.6□□□□□ -0.39
CDC23-201ENST00000394884 CYP2C18P33260 490 aa12.6□□□□□ -0.39
CDC23-201ENST00000394884 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
CDC23-201ENST00000394884 MAP3K10Q02779 954 aa12.6□□□□□ -0.39
CDC23-201ENST00000394884 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
CDC23-201ENST00000394884 DUSP27Q5VZP5 1158 aa12.6□□□□□ -0.39
CDC23-201ENST00000394884 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
CDC23-201ENST00000394884 TSC1Q92574 1164 aa12.6□□□□□ -0.39
CDC23-201ENST00000394884 ZNF594Q96JF6 807 aaPredicted RBP12.6□□□□□ -0.39
CDC23-201ENST00000394884 ALG13Q9NP73 1137 aaKnown RBP12.6□□□□□ -0.39
CDC23-201ENST00000394884 XPNPEP3Q9NQH7 507 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms