RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SYCE3A1L190 88 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 SPTLC2O15270 562 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 ZYXQ15942 572 aaKnown RBP14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 DLK2Q6UY11 383 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 TNFRSF25Q93038 417 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 BRMS1Q9HCU9 246 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 PCDHB6Q9Y5E3 794 aa14.01□□□□□ -0.17
SPTBN1-203ENST00000389980 WNT7AO00755 349 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 YEATS4O95619 227 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 NAPAP54920 295 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 PTPAQ15257 358 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 DCAF4Q8WV16 495 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 COA7Q96BR5 231 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 SH3GLB2Q9NR46 395 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 SLC39A14Q15043 492 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 PIK3AP1Q6ZUJ8 805 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 BLIDQ8IZY5 108 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 GMCL1P1Q8NEA9 526 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 GOLPH3LQ9H4A5 285 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 PCDHA4Q9UN74 947 aa14□□□□□ -0.17
SPTBN1-203ENST00000389980 PPP1R11O60927 126 aaPredicted RBP13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 NR1I2O75469 434 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 SNAP25P60880 206 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 RILPL1Q5EBL4 403 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 KCNG4Q8TDN1 519 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 ARHGEF10LQ9HCE6 1279 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 DACT1Q9NYF0 836 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 TMEM232C9JQI7 657 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 CALML3P27482 149 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 LMOD1P29536 600 aaPredicted RBP13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 INPP5BP32019 993 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 APOBEC3FQ8IUX4 373 aaKnown RBP13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 GRPEL1Q9HAV7 217 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 TMX2Q9Y320 296 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
SPTBN1-203ENST00000389980 SMCHD1A6NHR9 2005 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 ASNSP08243 561 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 BMP3P12645 472 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 IKQ13123 557 aaPredicted RBP13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 CAMK4Q16566 473 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 CCDC148Q8NFR7 591 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 SYAP1Q96A49 352 aaPredicted RBP13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 GMCL1Q96IK5 515 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 PNMA6FA0A0J9YX94 578 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 SMCO2A6NFE2 343 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 M0R2N6 131 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 AXDND1Q5T1B0 1012 aaPredicted RBP13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 CCDC183Q5T5S1 534 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 ADALQ6DHV7 355 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 FSIP1Q8NA03 581 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 CLIC6Q96NY7 704 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 ZMYND12Q9H0C1 365 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 ADARB2Q9NS39 739 aaKnown RBP13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 PCDHA6Q9UN73 950 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 PCDHA8Q9Y5H6 950 aa13.98□□□□□ -0.17
SPTBN1-203ENST00000389980 A0A1B0GVL5 298 aa13.97□□□□□ -0.17
SPTBN1-203ENST00000389980 ZBTB5O15062 677 aa13.97□□□□□ -0.17
SPTBN1-203ENST00000389980 DGKZQ13574 1117 aa13.97□□□□□ -0.17
SPTBN1-203ENST00000389980 PRKG1Q13976 671 aa13.97□□□□□ -0.17
SPTBN1-203ENST00000389980 ZNF174Q15697 407 aa13.97□□□□□ -0.17
SPTBN1-203ENST00000389980 FAM83BQ5T0W9 1011 aa13.97□□□□□ -0.17
SPTBN1-203ENST00000389980 ZKSCAN4Q969J2 545 aaPredicted RBP13.97□□□□□ -0.17
SPTBN1-203ENST00000389980 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
SPTBN1-203ENST00000389980 MRE11P49959 708 aa13.96□□□□□ -0.17
SPTBN1-203ENST00000389980 ZNF445P59923 1031 aa13.96□□□□□ -0.17
SPTBN1-203ENST00000389980 QRICH1Q2TAL8 776 aa13.96□□□□□ -0.17
SPTBN1-203ENST00000389980 MTMR8Q96EF0 704 aa13.96□□□□□ -0.17
SPTBN1-203ENST00000389980 ZNF341Q9BYN7 854 aa13.96□□□□□ -0.17
SPTBN1-203ENST00000389980 GOPCQ9HD26 462 aa13.96□□□□□ -0.17
SPTBN1-203ENST00000389980 TRIM75PA6NK02 468 aa13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 GRIN1Q05586 938 aa13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 CDC37Q16543 378 aaPredicted RBP13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 CCDC12Q8WUD4 166 aaPredicted RBP13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 C6orf50Q9HD87 102 aa13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.18
SPTBN1-203ENST00000389980 CCDC194A0A1B0GVG4 234 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 SSC5DA1L4H1 1573 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 PPP6R2O75170 966 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 SNW1Q13573 536 aaKnown RBP13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 INF2Q27J81 1249 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 SPECC1Q5M775 1068 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 TTC38Q5R3I4 469 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 SYDE2Q5VT97 1194 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 DPY19L2Q6NUT2 758 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 WRNIP1Q96S55 665 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 FEZ1Q99689 392 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 VCPKMTQ9H867 229 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 ADM5C9JUS6 153 aa13.95□□□□□ -0.18
SPTBN1-203ENST00000389980 NDUFA8P51970 172 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms