RNA–Protein interactions for RNA: ENST00000374864.8

ITCH-202, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITCH, Length 6,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-202ENST00000374864 CELF1Q92879 486 aaKnown RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 TBC1D31Q96DN5 1066 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 TM6SF1Q9BZW5 370 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 MYO1AQ9UBC5 1043 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 CEP131Q9UPN4 1083 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 TACC3Q9Y6A5 838 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 TMEM131LA2VDJ0 1609 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 TRAF5O00463 557 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 PLA2G4AP47712 749 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 RFX5P48382 616 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 TOB1P50616 345 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 VSNL1P62760 191 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 CCDC152Q4G0S7 254 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 USPL1Q5W0Q7 1092 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 CLEC17AQ6ZS10 378 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.82□□□□□ -1.64
ITCH-202ENST00000374864 TACO1Q9BSH4 297 aaKnown RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 ZSCAN5CA6NGD5 496 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 SLFN14P0C7P3 912 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 CDC25CP30307 473 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 HOXA13P31271 388 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 CRKLP46109 303 aaKnown RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 STIM1Q13586 685 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 FAM47EQ6ZV65 393 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 ZSCAN10Q96SZ4 725 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 NAPGQ99747 312 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 MYO6Q9UM54 1294 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 CALCAP01258 141 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 CMA1P23946 247 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 SLC39A14Q15043 492 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 KRT31Q15323 416 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 SYCP1Q15431 976 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 TRIP13Q15645 432 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 CCDC84Q86UT8 332 aaPredicted RBP4.82□□□□□ -1.64
ITCH-202ENST00000374864 GLIS3Q8NEA6 775 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 COPRSQ9NQ92 184 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 ATG3Q9NT62 314 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 ADAMTSL3P82987 1691 aa4.82□□□□□ -1.64
ITCH-202ENST00000374864 SETBP1Q9Y6X0 1596 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 RNF225M0QZC1 329 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 PDE8BO95263 885 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 RPN1P04843 607 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 EXOSC10Q01780 885 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 E2F5Q15329 346 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 FBXW10Q5XX13 1052 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 ZNF274Q96GC6 653 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 CCDC42Q96M95 316 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 CCDC43Q96MW1 224 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 KRT23Q9C075 422 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 NBPF3Q9H094 633 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 CALCOCO1Q9P1Z2 691 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 PCDHB13Q9Y5F0 798 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 AOX1Q06278 1338 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 ZNF335Q9H4Z2 1342 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 MMP1P03956 469 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 BMP6P22004 513 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 RFC4P35249 363 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 MECOMQ03112 1051 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 BRAPQ7Z569 592 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 MB21D2Q8IYB1 491 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 ZBTB38Q8NAP3 1195 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 TMEM87AQ8NBN3 555 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 CCDC47Q96A33 483 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 PPP1R16BQ96T49 567 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 SETDB2Q96T68 719 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 KRT12Q99456 494 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 LUC7L2Q9Y383 392 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 PDE8AO60658 829 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 ERLIN1O75477 346 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 RAD17O75943 681 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 GGCXP38435 758 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 POLR2FP61218 127 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 EHHADHQ08426 723 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 IFFO1Q0D2I5 559 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 GJB7Q6PEY0 223 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 DPP8Q6V1X1 898 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 SRBD1Q8N5C6 995 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 ANKRD7Q92527 254 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 WASF1Q92558 559 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 NLRP3Q96P20 1036 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 THRAP3Q9Y2W1 955 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 ZBTB12Q9Y330 459 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 F5H423 210 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 ACTN4O43707 911 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 CUTAO60888 179 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 LRRN2O75325 713 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 GDF11O95390 407 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 PARP1P09874 1014 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 ARID4AP29374 1257 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 SNX1Q13596 522 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 TTF1Q15361 905 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 VSTM4Q8IW00 320 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 ENAHQ8N8S7 591 aaPredicted RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 PIGSQ96S52 555 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 PCIF1Q9H4Z3 704 aa4.81□□□□□ -1.64
ITCH-202ENST00000374864 CWC15Q9P013 229 aaKnown RBP4.81□□□□□ -1.64
ITCH-202ENST00000374864 AFDNP55196 1824 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms