RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 XPO4Q9C0E2 1151 aaKnown RBP13.79□□□□□ -0.2
HMGCL-202ENST00000374487 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 SERTAD1Q9UHV2 236 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 PSME4Q14997 1843 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 MDM2Q00987 491 aaPredicted RBP13.79□□□□□ -0.2
HMGCL-202ENST00000374487 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
HMGCL-202ENST00000374487 EARS2Q5JPH6 523 aaKnown RBP13.79□□□□□ -0.2
HMGCL-202ENST00000374487 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
HMGCL-202ENST00000374487 MAPKAPK5Q8IW41 473 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 PNMA1Q8ND90 353 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 IMPACTQ9P2X3 320 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 SAP30BPQ9UHR5 308 aaKnown RBP13.79□□□□□ -0.2
HMGCL-202ENST00000374487 FAM205AQ6ZU69 1335 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 ADM5C9JUS6 153 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 FOXN1O15353 648 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 SKILP12757 684 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 HSPA6P17066 643 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 FSTL1Q12841 308 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 ARID5BQ14865 1188 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 ZNF174Q15697 407 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 SMARCE1Q969G3 411 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 DYNC1I1O14576 645 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 SERPINC1P01008 464 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 BTDP43251 543 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
HMGCL-202ENST00000374487 MYRIPQ8NFW9 859 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 FERMT2Q96AC1 680 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 GGA3Q9NZ52 723 aa13.78□□□□□ -0.2
HMGCL-202ENST00000374487 MAST2Q6P0Q8 1798 aa13.77□□□□□ -0.2
HMGCL-202ENST00000374487 WNT10BO00744 389 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 PLCG2P16885 1265 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 GNAQP50148 359 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 PLCD1P51178 756 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 FANCCQ00597 558 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 TPD52L1Q16890 204 aaPredicted RBP13.77□□□□□ -0.21
HMGCL-202ENST00000374487 PIK3AP1Q6ZUJ8 805 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 USP49Q70CQ1 688 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 TEX11Q8IYF3 940 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 DACH1Q9UI36 760 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 STX8Q9UNK0 236 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 TTF2Q9UNY4 1162 aaKnown RBP13.77□□□□□ -0.21
HMGCL-202ENST00000374487 MORC2Q9Y6X9 1032 aaPredicted RBP13.77□□□□□ -0.21
HMGCL-202ENST00000374487 PCNTO95613 3336 aa13.77□□□□□ -0.21
HMGCL-202ENST00000374487 CALML3P27482 149 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 NPY5RQ15761 445 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 PRMT6Q96LA8 375 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-202ENST00000374487 C16orf45Q96MC5 204 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-202ENST00000374487 MAN1B1Q9UKM7 699 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 ATP1A3P13637 1013 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 UBASH3AP57075 661 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 GRAMD1CQ8IYS0 662 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 OGFOD1Q8N543 542 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 SLC44A5Q8NCS7 719 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 TBC1D22AQ8WUA7 517 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 TNFRSF25Q93038 417 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 DHX58Q96C10 678 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 EPSTI1Q96J88 318 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 OSBPL5Q9H0X9 879 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-202ENST00000374487 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 PGAP2Q9UHJ9 254 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 PASKQ96RG2 1323 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 ROBO3Q96MS0 1386 aa13.76□□□□□ -0.21
HMGCL-202ENST00000374487 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 CLRN2A0PK11 232 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 ACTN4O43707 911 aaKnown RBP13.75□□□□□ -0.21
HMGCL-202ENST00000374487 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 RBM5P52756 815 aaKnown RBP eCLIP13.75□□□□□ -0.21
HMGCL-202ENST00000374487 PTGDRQ13258 359 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 DHX8Q14562 1220 aaKnown RBP13.75□□□□□ -0.21
HMGCL-202ENST00000374487 CFAP100Q494V2 611 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 NOM1Q5C9Z4 860 aaKnown RBP13.75□□□□□ -0.21
HMGCL-202ENST00000374487 NT5DC1Q5TFE4 455 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 CST9Q5W186 159 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 MLKLQ8NB16 471 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
HMGCL-202ENST00000374487 ZNF408Q9H9D4 720 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 MYH6P13533 1939 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 LAMB1P07942 1786 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 MYO3BQ8WXR4 1341 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 VWA3AA6NCI4 1184 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 MYO1BO43795 1136 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 NRDCO43847 1150 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 BMP6P22004 513 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 GRM4Q14833 912 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 STAG2Q8N3U4 1231 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 TRIML1Q8N9V2 468 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 SH3GLB2Q9NR46 395 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 FANCLQ9NW38 375 aa13.75□□□□□ -0.21
HMGCL-202ENST00000374487 WNT7AO00755 349 aa13.74□□□□□ -0.21
HMGCL-202ENST00000374487 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms