RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 KIAA1468Q9P260 1216 aa10.72□□□□□ -0.69
CNIH4-202ENST00000366857 FOXN1O15353 648 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 PPP4R3AQ6IN85 833 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 MRPS27Q92552 414 aaKnown RBP10.71□□□□□ -0.69
CNIH4-202ENST00000366857 TMEM60Q9H2L4 133 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 ASTN2O75129 1339 aaPredicted RBP10.71□□□□□ -0.69
CNIH4-202ENST00000366857 POTECB2RU33 542 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 ZNF202O95125 648 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 USP17L2Q6R6M4 530 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 ZC3H3Q8IXZ2 948 aaKnown RBP10.71□□□□□ -0.69
CNIH4-202ENST00000366857 CCDC17Q96LX7 622 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 ZNF396Q96N95 335 aaPredicted RBP10.71□□□□□ -0.69
CNIH4-202ENST00000366857 PIM2Q9P1W9 311 aa10.71□□□□□ -0.69
CNIH4-202ENST00000366857 HSP90AA1P07900 732 aaKnown RBP10.71□□□□□ -0.7
CNIH4-202ENST00000366857 TMEM174Q8WUU8 243 aa10.71□□□□□ -0.7
CNIH4-202ENST00000366857 UBAC1Q9BSL1 405 aa10.71□□□□□ -0.7
CNIH4-202ENST00000366857 TMX1Q9H3N1 280 aa10.71□□□□□ -0.7
CNIH4-202ENST00000366857 CBX8Q9HC52 389 aa10.71□□□□□ -0.7
CNIH4-202ENST00000366857 PCDHA2Q9Y5H9 948 aa10.71□□□□□ -0.7
CNIH4-202ENST00000366857 IGLV3-22A0A075B6J6 115 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 POLR3DP05423 398 aaPredicted RBP10.7□□□□□ -0.7
CNIH4-202ENST00000366857 FECHP22830 423 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 KRT2P35908 639 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 NOL9Q5SY16 702 aaKnown RBP10.7□□□□□ -0.7
CNIH4-202ENST00000366857 FAM184AQ8NB25 1140 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 ETNPPLQ8TBG4 499 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 KBTBD4Q9NVX7 518 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 CYP3A4P08684 503 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 SART3Q15020 963 aaKnown RBP10.7□□□□□ -0.7
CNIH4-202ENST00000366857 CSPP1Q1MSJ5 1256 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
CNIH4-202ENST00000366857 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 TDRD3Q9H7E2 651 aaKnown RBP10.7□□□□□ -0.7
CNIH4-202ENST00000366857 USP5P45974 858 aa10.7□□□□□ -0.7
CNIH4-202ENST00000366857 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
CNIH4-202ENST00000366857 FRMD3A2A2Y4 597 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 EEF2P13639 858 aaKnown RBP10.69□□□□□ -0.7
CNIH4-202ENST00000366857 CIITAP33076 1130 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 CACNB3P54284 484 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 DPY19L2P1Q6NXN4 242 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 BLIDQ8IZY5 108 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 TSPY26PQ9H489 355 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 MYOZ2Q9NPC6 264 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 USP25Q9UHP3 1055 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 PFASO15067 1338 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 A0A1B0GVL5 298 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 KLRF2D3W0D1 207 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 TBX2Q13207 712 aaPredicted RBP10.69□□□□□ -0.7
CNIH4-202ENST00000366857 NBPF9Q3BBW0 867 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 TMEM119Q4V9L6 283 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 MOXD1Q6UVY6 613 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 TMEM179Q6ZVK1 233 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 GZF1Q9H116 711 aaPredicted RBP10.69□□□□□ -0.7
CNIH4-202ENST00000366857 PITPNM2Q9BZ72 1349 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 hCG_1642624A0A1W2PR95 340 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 TSPY2A6NKD2 308 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 KIAA0825Q8IV33 1275 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.7
CNIH4-202ENST00000366857 C12orf42Q96LP6 360 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 CPVLQ9H3G5 476 aa10.69□□□□□ -0.7
CNIH4-202ENST00000366857 NOL7Q9UMY1 257 aaKnown RBP10.69□□□□□ -0.7
CNIH4-202ENST00000366857 COL4A4P53420 1690 aaPredicted RBP10.69□□□□□ -0.7
CNIH4-202ENST00000366857 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 CTAGE5O15320 804 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 TSPY3P0CV98 308 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 TSPY8P0CW00 308 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
CNIH4-202ENST00000366857 FOXR2Q6PJQ5 311 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 ZBTB12Q9Y330 459 aaPredicted RBP10.68□□□□□ -0.7
CNIH4-202ENST00000366857 GOLGA6L22H0YM25 854 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 ZNF500O60304 480 aaPredicted RBP10.68□□□□□ -0.7
CNIH4-202ENST00000366857 CCDC173Q0VFZ6 552 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 CDKAL1Q5VV42 579 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 LRRC10BA6NIK2 292 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 IKBKBO14920 756 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 IGHA2P01877 340 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 SLC3A2P08195 630 aaKnown RBP10.68□□□□□ -0.7
CNIH4-202ENST00000366857 CAP2P40123 477 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 HSD17B4P51659 736 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 SEMA3FQ13275 785 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 CLEC4DQ8WXI8 215 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 GPKOWQ92917 476 aaPredicted RBP eCLIP10.68□□□□□ -0.7
CNIH4-202ENST00000366857 GINM1Q9NU53 330 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 RALGAPA2Q2PPJ7 1873 aa10.68□□□□□ -0.7
CNIH4-202ENST00000366857 LAD1O00515 517 aa10.67□□□□□ -0.7
CNIH4-202ENST00000366857 DPCR1Q3MIW9 517 aa10.67□□□□□ -0.7
CNIH4-202ENST00000366857 Q4G0T1 1027 aa10.67□□□□□ -0.7
CNIH4-202ENST00000366857 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
CNIH4-202ENST00000366857 KRI1Q8N9T8 703 aaKnown RBP10.67□□□□□ -0.7
CNIH4-202ENST00000366857 FAM200AQ8TCP9 573 aa10.67□□□□□ -0.7
CNIH4-202ENST00000366857 KCNN1Q92952 543 aa10.67□□□□□ -0.7
CNIH4-202ENST00000366857 FERMT2Q96AC1 680 aa10.67□□□□□ -0.7
CNIH4-202ENST00000366857 L3MBTL3Q96JM7 780 aaPredicted RBP10.67□□□□□ -0.7
CNIH4-202ENST00000366857 PNMA5Q96PV4 448 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms