RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 PCBP3P57721 371 aaKnown RBP3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 KRTAP10-2P60368 255 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 ERVFRD-1P60508 538 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 SLC14A2Q15849 920 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 HSF5Q4G112 596 aaPredicted RBP3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 TMEFF1Q8IYR6 380 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 ZNF512BQ96KM6 892 aaPredicted RBP3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 PRDM14Q9GZV8 571 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 CNNM2Q9H8M5 875 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 RTEL1Q9NZ71 1219 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 GMIPQ9P107 970 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 KLHL14Q9P2G3 628 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 VTI1BQ9UEU0 232 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 ROBO2Q9HCK4 1378 aa3.86□□□□□ -1.79
RNU4-90P-201ENST00000362773 OTOL1A6NHN0 477 aaPredicted RBP3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 CTSKP43235 329 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 AFF3P51826 1226 aaKnown RBP3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 RTP1P59025 263 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 CWF19L2Q2TBE0 894 aaKnown RBP3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 TMEM151BQ8IW70 566 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 ATG4CQ96DT6 458 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 FCRL2Q96LA5 508 aaPredicted RBP3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 ANTXR1Q9H6X2 564 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 EHMT1Q9H9B1 1298 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 ERVK13-1Q9NX77 482 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 SIRT5Q9NXA8 310 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 JAG2Q9Y219 1238 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 GPR55Q9Y2T6 319 aaPredicted RBP3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 IRAK3Q9Y616 596 aa3.85□□□□□ -1.79
RNU4-90P-201ENST00000362773 EIF4A3P38919 411 aaKnown RBP3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 CHMP4BP1P59074 171 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 CLCQ05315 142 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 NFIXQ14938 502 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 NLRC3Q7RTR2 1065 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 SLCO6A1Q86UG4 719 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 FAM129CQ86XR2 697 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 IGDCC3Q8IVU1 814 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 TMEM192Q8IY95 271 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 MZB1Q8WU39 189 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 TNFRSF12AQ9NP84 129 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 UBP1Q9NZI7 540 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 TNFRSF10DQ9UBN6 386 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 ADAMTS1Q9UHI8 967 aa3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 SUPT16HQ9Y5B9 1047 aaKnown RBP3.84□□□□□ -1.79
RNU4-90P-201ENST00000362773 SSU72P8A0A1W2PR75 194 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 CLEC3AO75596 197 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 ZNF205O95201 554 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 NME1P15531 152 aaKnown RBP3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 SYN1P17600 705 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 CCNFP41002 786 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 MLECQ14165 292 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 VMACQ2NL98 169 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 SKOR2Q2VWA4 1001 aaPredicted RBP3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 GALNT18Q6P9A2 607 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 LDHDQ86WU2 507 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 AEBP1Q8IUX7 1158 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 TMEM52Q8NDY8 209 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 CXorf38Q8TB03 319 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 FEZF2Q8TBJ5 459 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 ZNF296Q8WUU4 475 aaPredicted RBP3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 MRS2Q9HD23 443 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 CHST7Q9NS84 486 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 GFOD1Q9NXC2 390 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 PCDHA5Q9Y5H7 936 aa3.83□□□□□ -1.8
RNU4-90P-201ENST00000362773 WTIPA6NIX2 430 aaPredicted RBP3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 MEIS3P2A8K0S8 358 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 MEIS1O00470 390 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 TNFRSF10CO14798 259 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 SHOXO15266 292 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 BMP8BP34820 402 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 RAD51AP2Q09MP3 1159 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 SEZ6Q53EL9 994 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 RTP2Q5QGT7 225 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 CNKSR3Q6P9H4 555 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 CRTC3Q6UUV7 619 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 GK5Q6ZS86 529 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 TMC6Q7Z403 805 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 REXO1Q8N1G1 1221 aaKnown RBP3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 TP53I13Q8NBR0 393 aaPredicted RBP3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 SYT8Q8NBV8 401 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 SLC6A18Q96N87 628 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 AP5S1Q9NUS5 200 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 ACSL6Q9UKU0 697 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 TAF6LQ9Y6J9 622 aa3.82□□□□□ -1.8
RNU4-90P-201ENST00000362773 A0A1W2PQ45 241 aaPredicted RBP3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 A0A1W2PQY0 241 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 NUDT19A8MXV4 375 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 ABLIM1O14639 778 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 SASH1O94885 1247 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 MPOP05164 745 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 VAV1P15498 845 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 PRKCAP17252 672 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 NCKAP1LP55160 1127 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 NFKB2Q00653 900 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 LAPTM5Q13571 262 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 CBX2Q14781 532 aaPredicted RBP3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 RAB3GAP1Q15042 981 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 RPTNQ6XPR3 784 aa3.81□□□□□ -1.8
RNU4-90P-201ENST00000362773 NUP43Q8NFH3 380 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms