RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FANCLQ9NW38 375 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 SOS1Q07889 1333 aaPredicted RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 HGSO14964 777 aaPredicted RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 GSPT1P15170 499 aaKnown RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 KCNA3P22001 575 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 HSPA9P38646 679 aaKnown RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 MAGEA1P43355 309 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 NEK2P51955 445 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CCDC144BQ3MJ40 725 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CCDC144CPQ8IYA2 1237 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CNGB3Q9NQW8 809 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 UBAP1Q9NZ09 502 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 DKK3Q9UBP4 350 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 HPCAL4Q9UM19 191 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TACC3Q9Y6A5 838 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 KDM6BO15054 1643 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TTC21AQ8NDW8 1320 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 ANO9A1A5B4 782 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TRIM75PA6NK02 468 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 GSTA1P08263 222 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 GFAPP14136 432 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 ERCC5P28715 1186 aaPredicted RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 PDE1BQ01064 536 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 DYDC2Q96IM9 177 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TSNARE1Q96NA8 513 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 DNAI2Q9GZS0 605 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 VPS16Q9H269 839 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CORO1CQ9ULV4 474 aaPredicted RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 CTNND2Q9UQB3 1225 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 HEXIM1O94992 359 aaKnown RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 MMEP08473 750 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TTF1Q15361 905 aaPredicted RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 BEND6Q5SZJ8 279 aaPredicted RBP5.52□□□□□ -1.53
SKP1-202ENST00000353411 CXorf38Q8TB03 319 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 DNAJC9Q8WXX5 260 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 EPB41L5Q9HCM4 733 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 CCDC87Q9NVE4 849 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 ATP5JP18859 108 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 MAP3K7CLP57077 242 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 PPP4R4Q6NUP7 873 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 OLFML1Q6UWY5 402 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 LRRC43Q8N309 656 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 ZHX3Q9H4I2 956 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 ECT2Q9H8V3 914 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 TNRQ92752 1358 aa5.52□□□□□ -1.53
SKP1-202ENST00000353411 MAGEA13PA6NCF6 341 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 DKC1O60832 514 aaKnown RBP eCLIP5.51□□□□□ -1.53
SKP1-202ENST00000353411 AP2B1P63010 937 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 KCNB1Q14721 858 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 MCMDC2Q4G0Z9 681 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 TTLL7Q6ZT98 887 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 MGARPQ8TDB4 240 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 GRAMD1AQ96CP6 724 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 ABLIM1O14639 778 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 SERPINB6P35237 376 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 CCZ1BP86790 482 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 CCZ1P86791 482 aaPredicted RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 SNX1Q13596 522 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 CLMNQ96JQ2 1002 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 NOC4LQ9BVI4 516 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 TMEM60Q9H2L4 133 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 TYW1Q9NV66 732 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 TNNQ9UQP3 1299 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 KLF18A0A0U1RQI7 1052 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 ARHGAP42A6NI28 874 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 PLCD1P51178 756 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 CRELD2Q6UXH1 353 aaPredicted RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 WDR75Q8IWA0 830 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 RNF41Q9H4P4 317 aaPredicted RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 MYO18AQ92614 2054 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 FAM200BP0CF97 657 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 CSB-PGBD3P0DP91 1061 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 DNM2P50570 870 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 RPS6KA3P51812 740 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 BLVRAP53004 296 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 DHX9Q08211 1270 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 NAA35Q5VZE5 725 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 E4F1Q66K89 784 aaPredicted RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 CCDC125Q86Z20 511 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 NAP1L4Q99733 375 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 GORASP1Q9BQQ3 440 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 CARD9Q9H257 536 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 C19orf44Q9H6X5 657 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 MBIPQ9NS73 344 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 STK24Q9Y6E0 443 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 ZNF521Q96K83 1311 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 RASGRF2O14827 1237 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 NVLO15381 856 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 S100BP04271 92 aaPredicted RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 VIL1P09327 827 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 MSH2P43246 934 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 RRS1Q15050 365 aaKnown RBP5.51□□□□□ -1.53
SKP1-202ENST00000353411 IQCB1Q15051 598 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 SPATA1Q5VX52 437 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 NUGGCQ68CJ6 796 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 DUOX2Q9NRD8 1548 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 GNAT2P19087 354 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 SERPINB3P29508 390 aa5.51□□□□□ -1.53
SKP1-202ENST00000353411 BASP1P80723 227 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms