RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 NUCKS1Q9H1E3 243 aaKnown RBP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 TSKSQ9UJT2 592 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 H7C1D1 291 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 HGSO14964 777 aaPredicted RBP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.43
PTPN11-201ENST00000351677 RASGRP4Q8TDF6 673 aa17.71■□□□□ 0.43
PTPN11-201ENST00000351677 ATP2B4P23634 1241 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 ETF1P62495 437 aaKnown RBP17.7■□□□□ 0.42
PTPN11-201ENST00000351677 CCDC105Q8IYK2 499 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 TDRD7Q8NHU6 1098 aaKnown RBP17.7■□□□□ 0.42
PTPN11-201ENST00000351677 INTS8Q75QN2 995 aaKnown RBP17.7■□□□□ 0.42
PTPN11-201ENST00000351677 E7EVH7 732 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 POLA2Q14181 598 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 SMYD4Q8IYR2 804 aaPredicted RBP17.7■□□□□ 0.42
PTPN11-201ENST00000351677 TRIM7Q9C029 511 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 DCUN1D2Q6PH85 259 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 B4GALNT4Q76KP1 1039 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 GRAMD1CQ8IYS0 662 aa17.7■□□□□ 0.42
PTPN11-201ENST00000351677 PPP6R2O75170 966 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 GUCY2FP51841 1108 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 MAP3K9P80192 1104 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 PTCH1Q13635 1447 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 MIER3Q7Z3K6 550 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 CARD10Q9BWT7 1032 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 RASSF4Q9H2L5 321 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 FAM204AQ9H8W3 233 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 GABPB1Q06547 395 aaPredicted RBP17.69■□□□□ 0.42
PTPN11-201ENST00000351677 WHAMMP3Q1A5X7 153 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 SUPT20HQ8NEM7 779 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 POLR3EQ9NVU0 708 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
PTPN11-201ENST00000351677 APBA3O96018 575 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 TRIM58Q8NG06 486 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPN11-201ENST00000351677 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
PTPN11-201ENST00000351677 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 FOXP1Q9H334 677 aaPredicted RBP17.69■□□□□ 0.42
PTPN11-201ENST00000351677 KRT19P08727 400 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 LONP1P36776 959 aaKnown RBP17.69■□□□□ 0.42
PTPN11-201ENST00000351677 KIF23Q02241 960 aaPredicted RBP17.69■□□□□ 0.42
PTPN11-201ENST00000351677 RASA3Q14644 834 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 LONRF2Q1L5Z9 754 aa17.69■□□□□ 0.42
PTPN11-201ENST00000351677 SORBS3O60504 671 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 POLR2FP61218 127 aaKnown RBP17.68■□□□□ 0.42
PTPN11-201ENST00000351677 TCP10L2B9ZVM9 353 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 CD19P15391 556 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
PTPN11-201ENST00000351677 STAT1P42224 750 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 TNNI1P19237 187 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 RUFY4Q6ZNE9 571 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 ERBB3P21860 1342 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 KCNK3O14649 394 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 COPB1P53618 953 aaKnown RBP17.68■□□□□ 0.42
PTPN11-201ENST00000351677 KCNQ4P56696 695 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 NR5A1Q13285 461 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 FAM102BQ5T8I3 360 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 CHURC1Q8WUH1 139 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 IQCDQ96DY2 449 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 PPP1R13BQ96KQ4 1090 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 HINFPQ9BQA5 517 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 TESPA1A2RU30 521 aaPredicted RBP17.68■□□□□ 0.42
PTPN11-201ENST00000351677 CASP14P31944 242 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 AZI2Q9H6S1 392 aa17.68■□□□□ 0.42
PTPN11-201ENST00000351677 ARMCX3Q9UH62 379 aaPredicted RBP17.68■□□□□ 0.42
PTPN11-201ENST00000351677 CFAP157Q5JU67 520 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 NIM1KQ8IY84 436 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 LINC00301Q8NCQ3 95 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 SWAP70Q9UH65 585 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 AMFRQ9UKV5 643 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 NECTIN1Q15223 517 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 NDC80O14777 642 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
PTPN11-201ENST00000351677 CCDC14Q49A88 953 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 ERFEQ4G0M1 354 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 NLRX1Q86UT6 975 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 NLRP10Q86W26 655 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 FBXO11Q86XK2 927 aa17.67■□□□□ 0.42
PTPN11-201ENST00000351677 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
PTPN11-201ENST00000351677 PDE6BP35913 854 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 BRD3Q15059 726 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
PTPN11-201ENST00000351677 ALAS1P13196 640 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 CYP4A11Q02928 519 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 ICA1Q05084 483 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
PTPN11-201ENST00000351677 AIFM3Q96NN9 605 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 SH2B2O14492 632 aaPredicted RBP17.66■□□□□ 0.42
PTPN11-201ENST00000351677 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 SLFN12Q8IYM2 578 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 THRAP3Q9Y2W1 955 aaKnown RBP17.66■□□□□ 0.42
PTPN11-201ENST00000351677 PPFIA1Q13136 1202 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 RCOR1Q9UKL0 485 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 HYOU1Q9Y4L1 999 aa17.66■□□□□ 0.42
PTPN11-201ENST00000351677 EPN1Q9Y6I3 576 aaPredicted RBP17.66■□□□□ 0.42
PTPN11-201ENST00000351677 ZCCHC11Q5TAX3 1644 aaKnown RBP17.66■□□□□ 0.42
PTPN11-201ENST00000351677 EFCAB8A8MWE9 144 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 PCP11498 1178 aaKnown RBP17.65■□□□□ 0.42
PTPN11-201ENST00000351677 CDC25BP30305 580 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms