RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SERPINC1P01008 464 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 CRKP46108 304 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 FANCCQ00597 558 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 TCP10Q12799 353 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 SLC15A2Q16348 729 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 INF2Q27J81 1249 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 RRP36Q96EU6 259 aaKnown RBP8.61□□□□□ -1.03
IFT88-201ENST00000319980 PIGSQ96S52 555 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 OSBPL5Q9H0X9 879 aaPredicted RBP8.61□□□□□ -1.03
IFT88-201ENST00000319980 SEC63Q9UGP8 760 aaKnown RBP8.61□□□□□ -1.03
IFT88-201ENST00000319980 M0R2N6 131 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 MPHOSPH10O00566 681 aaKnown RBP8.61□□□□□ -1.03
IFT88-201ENST00000319980 PDHBP11177 359 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 PTGER2P43116 358 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 MORC3Q14149 939 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 ZFPM1Q8IX07 1006 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 PAGE5Q96GU1 130 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 SPON1Q9HCB6 807 aa8.61□□□□□ -1.03
IFT88-201ENST00000319980 DLEC1Q9Y238 1755 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 SMCO2A6NFE2 343 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 UBASH3AP57075 661 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 GALNT17Q6IS24 598 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 TMC6Q7Z403 805 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 MLKLQ8NB16 471 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 SPATA20Q8TB22 786 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 ZMYND12Q9H0C1 365 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 ECE2O60344 883 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 HLA-DOAP06340 250 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 SKILP12757 684 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 NOVP48745 357 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 FMR1Q06787 632 aaKnown RBP eCLIP8.6□□□□□ -1.03
IFT88-201ENST00000319980 CFAP100Q494V2 611 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 STRIP1Q5VSL9 837 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 ARL6IP4Q66PJ3 421 aaKnown RBP8.6□□□□□ -1.03
IFT88-201ENST00000319980 STYK1Q6J9G0 422 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 TRMT44Q8IYL2 757 aaKnown RBP8.6□□□□□ -1.03
IFT88-201ENST00000319980 ANKRD31Q8N7Z5 1873 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 TRIML1Q8N9V2 468 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 IQUBQ8NA54 791 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 CCDC12Q8WUD4 166 aaPredicted RBP8.6□□□□□ -1.03
IFT88-201ENST00000319980 SWAP70Q9UH65 585 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 MYH6P13533 1939 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 LTBP1Q14766 1721 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 TTLL1O95922 423 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 GNA11P29992 359 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 SHMT1P34896 483 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 AOC3Q16853 763 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 SOGA3Q5TF21 947 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 ZSCAN29Q8IWY8 852 aaPredicted RBP8.6□□□□□ -1.03
IFT88-201ENST00000319980 DAGLBQ8NCG7 672 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 DPF2Q92785 391 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 ZDHHC15Q96MV8 337 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 TMEM60Q9H2L4 133 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 C6orf50Q9HD87 102 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 GPCPD1Q9NPB8 672 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 DACH1Q9UI36 760 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 NFE2L3Q9Y4A8 694 aa8.6□□□□□ -1.03
IFT88-201ENST00000319980 LRRC37AA6NMS7 1700 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 NEMFO60524 1076 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 LETM2Q2VYF4 491 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 DACT2Q5SW24 774 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 KLHL10Q6JEL2 608 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 DTHD1Q6ZMT9 781 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 SH3RF1Q7Z6J0 888 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 CNKSR1Q969H4 720 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 BLZF1Q9H2G9 400 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 STK32BQ9NY57 414 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 NAV1Q8NEY1 1877 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 RAD21O60216 631 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 CDK11BP21127 795 aaKnown RBP8.59□□□□□ -1.03
IFT88-201ENST00000319980 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 LONP1P36776 959 aaKnown RBP8.59□□□□□ -1.03
IFT88-201ENST00000319980 TERF1P54274 439 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 GSDMDP57764 484 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 DPYDQ12882 1025 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 E2F4Q16254 413 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 PTPN21Q16825 1174 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 SMYD4Q8IYR2 804 aaPredicted RBP8.59□□□□□ -1.03
IFT88-201ENST00000319980 RASSF8Q8NHQ8 419 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 MED15Q96RN5 788 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 MTFR1LQ9H019 292 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 RIOX1Q9H6W3 641 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 IMPACTQ9P2X3 320 aa8.59□□□□□ -1.03
IFT88-201ENST00000319980 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
IFT88-201ENST00000319980 DDX60LQ5H9U9 1706 aaKnown RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 IGKV6D-41A0A0C4DH26 115 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 PP2D1A8MPX8 630 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 CCNT1O60563 726 aaKnown RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 TXLNAP40222 546 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 KARSQ15046 597 aaKnown RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 ASPRV1Q53RT3 343 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
IFT88-201ENST00000319980 ENOX1Q8TC92 643 aaKnown RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 COA7Q96BR5 231 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 C16orf45Q96MC5 204 aaPredicted RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 GSDMAQ96QA5 445 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms